Fitness for 5 genes in Dickeya dianthicola 67-19

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500 ntHGI48_RS01175 and HGI48_RS01180 are separated by 105 nucleotidesHGI48_RS01180 and HGI48_RS01185 are separated by 55 nucleotidesHGI48_RS01185 and HGI48_RS01190 overlap by 1 nucleotidesHGI48_RS01190 and HGI48_RS01195 are separated by 91 nucleotides HGI48_RS01175: HGI48_RS01175 - sigma D regulator, at 263,985 to 264,434 _RS01175 HGI48_RS01180: HGI48_RS01180 - NAD(+) diphosphatase, at 264,540 to 265,313 _RS01180 HGI48_RS01185: HGI48_RS01185 - uroporphyrinogen decarboxylase, at 265,369 to 266,442 _RS01185 HGI48_RS01190: HGI48_RS01190 - deoxyribonuclease V, at 266,442 to 267,116 _RS01190 HGI48_RS01195: HGI48_RS01195 - YjaG family protein, at 267,208 to 267,798 _RS01195
Group Condition HGI48_RS01175 HGI48_RS01180 HGI48_RS01185 HGI48_RS01190 HGI48_RS01195
control PDB -0.3 -0.1 N.D. +0.0 -0.8
plant Atlantic -0.0 -0.0 N.D. -0.1 -0.9
plant Atlantic +0.1 +0.2 N.D. -0.6 -0.7
carbon source M9+polygalacturonate +0.5 -0.3 N.D. +0.3 -1.3
plant Atlantic -0.0 +0.1 N.D. -0.1 -0.7
control LB +0.1 -0.2 N.D. +0.0 -0.7
control PDB -0.2 -0.1 N.D. -0.1 -0.3
carbon source M9+polygalacturonate +0.9 +0.0 N.D. -0.0 -1.6
control PDB +0.1 -0.0 N.D. -0.2 -0.5
plant Atlantic +0.3 -0.6 N.D. -0.3 -0.0
control LB -0.0 +0.1 N.D. -0.1 -0.5
plant Atlantic +0.2 -0.1 N.D. -0.1 -0.5
carbon source M9+glycerol +0.4 -0.2 N.D. +0.1 -0.6
plant Norland +0.1 +0.3 N.D. -0.2 -0.4
plant Norland -0.0 -0.1 N.D. +0.2 -0.3
plant Norland +0.2 +0.2 N.D. -0.0 -0.6
carbon source M9+glycerol +0.2 -0.1 N.D. +0.0 -0.2
control PDB +0.3 +0.3 N.D. +0.0 -0.6
carbon source M9+polygalacturonate +0.7 -0.3 N.D. -0.1 -0.3
plant Norland +0.4 +0.2 N.D. -0.1 -0.4
plant Atlantic +0.4 -0.2 N.D. +0.4 -0.3
carbon source M9+glycerol +0.5 -0.2 N.D. +0.1 -0.2
carbon source M9+glycerol +0.3 +0.1 N.D. +0.3 -0.3
carbon source M9+glycerol +0.5 -0.2 N.D. -0.0 +0.1
plant Upstate +0.3 +0.3 N.D. +0.1 -0.1
carbon source M9+glycerol +0.3 -0.1 N.D. -0.0 +0.4
plant Upstate +0.4 +0.1 N.D. +0.3 -0.0
carbon source M9+sucrose +0.3 +0.1 N.D. +0.1 +0.5
carbon source M9+sucrose +0.2 +0.4 N.D. +0.6 +0.2
carbon source M9+sucrose +0.8 +0.4 N.D. +0.2 +0.7
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