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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola 67-19
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HGI48_RS01145 and HGI48_RS01150 overlap by 1 nucleotides
HGI48_RS01150 and HGI48_RS01155 are separated by 1 nucleotides
HGI48_RS01155 and HGI48_RS01160 overlap by 4 nucleotides
HGI48_RS01160 and HGI48_RS01165 are separated by 1 nucleotides
HGI48_RS01145: HGI48_RS01145 - 2-iminoacetate synthase ThiH, at 258,170 to 259,315
_RS01145
HGI48_RS01150: HGI48_RS01150 - thiazole synthase, at 259,315 to 260,094
_RS01150
HGI48_RS01155: HGI48_RS01155 - sulfur carrier protein ThiS, at 260,096 to 260,296
_RS01155
HGI48_RS01160: HGI48_RS01160 - HesA/MoeB/ThiF family protein, at 260,293 to 261,045
_RS01160
HGI48_RS01165: HGI48_RS01165 - thiamine phosphate synthase, at 261,047 to 261,682
_RS01165
Group
Condition
HGI48
_RS01145
HGI48
_RS01150
HGI48
_RS01155
HGI48
_RS01160
HGI48
_RS01165
carbon source
M9+polygalacturonate
-2.6
-2.3
N.D.
-2.3
-1.4
carbon source
M9+polygalacturonate
-2.9
-2.2
N.D.
-1.1
-1.8
carbon source
M9+polygalacturonate
-2.4
-1.4
N.D.
-1.0
-1.3
carbon source
M9+sucrose
-2.0
-0.9
N.D.
-1.9
-0.8
carbon source
M9+sucrose
-1.6
-1.3
N.D.
-1.0
-1.1
carbon source
M9+sucrose
-1.1
-1.2
N.D.
-0.1
-1.4
carbon source
M9+glycerol
-0.8
-0.7
N.D.
-0.8
-1.4
carbon source
M9+glycerol
-1.2
-1.0
N.D.
-0.2
-1.3
carbon source
M9+glycerol
-0.7
-0.9
N.D.
-0.3
-0.9
carbon source
M9+glycerol
-0.7
-0.8
N.D.
-0.5
-0.2
carbon source
M9+glycerol
-0.7
-0.9
N.D.
-0.2
-0.1
plant
Norland
-0.1
-0.5
N.D.
-0.7
-0.3
control
PDB
-0.2
-0.6
N.D.
-0.6
-0.1
control
PDB
-0.1
-1.1
N.D.
-0.1
+0.0
plant
Upstate
-0.1
-0.4
N.D.
-0.6
-0.2
plant
Atlantic
-0.1
-0.4
N.D.
-0.2
-0.4
carbon source
M9+glycerol
-0.2
-0.2
N.D.
-0.4
-0.3
plant
Norland
-0.0
-0.7
N.D.
-0.3
-0.0
plant
Atlantic
+0.4
-1.3
N.D.
+0.3
-0.3
plant
Upstate
-0.2
-0.4
N.D.
-0.1
-0.2
control
LB
-0.0
-0.7
N.D.
+0.2
+0.2
plant
Atlantic
-0.2
-0.6
N.D.
+0.3
+0.2
plant
Norland
+0.3
-0.1
N.D.
-0.2
-0.2
plant
Norland
-0.1
-0.6
N.D.
+0.4
-0.0
plant
Upstate
+0.1
-0.8
N.D.
+0.0
+0.4
control
PDB
+0.1
-0.2
N.D.
+0.5
-0.3
plant
Norland
+0.0
-0.5
N.D.
+0.6
+0.1
control
PDB
-0.1
-0.4
N.D.
+0.7
+0.2
plant
Upstate
-0.2
-0.1
N.D.
+0.9
+0.0
plant
Atlantic
+0.2
+0.6
N.D.
-0.4
+0.6
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