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Gene
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Cofit
Fitness for 5 genes in
Dickeya dianthicola 67-19
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HGI48_RS01030 and HGI48_RS01035 are separated by 683 nucleotides
HGI48_RS01035 and HGI48_RS01040 are separated by 16 nucleotides
HGI48_RS01040 and HGI48_RS01045 are separated by 135 nucleotides
HGI48_RS01045 and HGI48_RS01050 are separated by 9 nucleotides
HGI48_RS01030: HGI48_RS01030 - type I pantothenate kinase, at 234,201 to 235,151
_RS01030
HGI48_RS01035: HGI48_RS01035 - tRNA-Thr, at 235,835 to 235,910
_RS01035
HGI48_RS01040: HGI48_RS01040 - tRNA-Tyr, at 235,927 to 236,011
_RS01040
HGI48_RS01045: HGI48_RS01045 - tRNA-Gly, at 236,147 to 236,221
_RS01045
HGI48_RS01050: HGI48_RS01050 - tRNA-Thr, at 236,231 to 236,306
_RS01050
Group
Condition
HGI48
_RS01030
HGI48
_RS01035
HGI48
_RS01040
HGI48
_RS01045
HGI48
_RS01050
plant
Norland
N.D.
N.D.
N.D.
N.D.
-2.4
plant
Norland
N.D.
N.D.
N.D.
N.D.
-2.3
plant
Norland
N.D.
N.D.
N.D.
N.D.
-2.0
control
LB
N.D.
N.D.
N.D.
N.D.
-1.6
plant
Norland
N.D.
N.D.
N.D.
N.D.
-1.6
plant
Norland
N.D.
N.D.
N.D.
N.D.
-1.5
carbon source
M9+polygalacturonate
N.D.
N.D.
N.D.
N.D.
-1.4
plant
Norland
N.D.
N.D.
N.D.
N.D.
-1.4
plant
Atlantic
N.D.
N.D.
N.D.
N.D.
-1.2
carbon source
M9+glycerol
N.D.
N.D.
N.D.
N.D.
-1.1
plant
Atlantic
N.D.
N.D.
N.D.
N.D.
-1.1
control
LB
N.D.
N.D.
N.D.
N.D.
-1.0
plant
Upstate
N.D.
N.D.
N.D.
N.D.
-1.0
control
LB
N.D.
N.D.
N.D.
N.D.
-0.9
control
PDB
N.D.
N.D.
N.D.
N.D.
-0.9
plant
Atlantic
N.D.
N.D.
N.D.
N.D.
-0.7
plant
Upstate
N.D.
N.D.
N.D.
N.D.
-0.7
plant
Upstate
N.D.
N.D.
N.D.
N.D.
-0.7
plant
Atlantic
N.D.
N.D.
N.D.
N.D.
-0.6
control
PDB
N.D.
N.D.
N.D.
N.D.
-0.6
control
LB
N.D.
N.D.
N.D.
N.D.
-0.6
plant
Upstate
N.D.
N.D.
N.D.
N.D.
-0.5
control
PDB
N.D.
N.D.
N.D.
N.D.
-0.4
carbon source
M9+polygalacturonate
N.D.
N.D.
N.D.
N.D.
+0.3
plant
Upstate
N.D.
N.D.
N.D.
N.D.
+0.6
carbon source
M9+glycerol
N.D.
N.D.
N.D.
N.D.
+0.6
carbon source
M9+glycerol
N.D.
N.D.
N.D.
N.D.
+0.8
carbon source
M9+sucrose
N.D.
N.D.
N.D.
N.D.
+1.8
carbon source
M9+sucrose
N.D.
N.D.
N.D.
N.D.
+2.1
carbon source
M9+sucrose
N.D.
N.D.
N.D.
N.D.
+2.8
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