Fitness for 5 genes in Dickeya dianthicola 67-19

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500 ntHGI48_RS00685 and HGI48_RS00690 are separated by 108 nucleotidesHGI48_RS00690 and HGI48_RS00695 overlap by 32 nucleotidesHGI48_RS00695 and HGI48_RS00700 are separated by 191 nucleotidesHGI48_RS00700 and HGI48_RS00705 are separated by 238 nucleotides HGI48_RS00685: HGI48_RS00685 - nucleoid occlusion factor SlmA, at 160,499 to 161,095 _RS00685 HGI48_RS00690: HGI48_RS00690 - dUTP diphosphatase, at 161,204 to 161,662 _RS00690 HGI48_RS00695: HGI48_RS00695 - bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC, at 161,631 to 162,887 _RS00695 HGI48_RS00700: HGI48_RS00700 - DNA repair protein RadC, at 163,079 to 163,744 _RS00700 HGI48_RS00705: HGI48_RS00705 - 50S ribosomal protein L28, at 163,983 to 164,219 _RS00705
Group Condition HGI48_RS00685 HGI48_RS00690 HGI48_RS00695 HGI48_RS00700 HGI48_RS00705
carbon source M9+glycerol -2.4 N.D. N.D. -0.6 N.D.
carbon source M9+glycerol -1.7 N.D. N.D. -0.8 N.D.
plant Atlantic -1.3 N.D. N.D. -0.7 N.D.
plant Upstate -0.8 N.D. N.D. -0.9 N.D.
plant Upstate -1.2 N.D. N.D. -0.4 N.D.
carbon source M9+glycerol -1.4 N.D. N.D. -0.1 N.D.
plant Upstate -0.9 N.D. N.D. -0.5 N.D.
plant Norland -0.9 N.D. N.D. -0.3 N.D.
control LB -0.4 N.D. N.D. -0.5 N.D.
control PDB -0.4 N.D. N.D. -0.4 N.D.
plant Norland -0.4 N.D. N.D. -0.3 N.D.
control LB +0.1 N.D. N.D. -0.8 N.D.
plant Atlantic +0.3 N.D. N.D. -1.0 N.D.
plant Atlantic -0.5 N.D. N.D. -0.2 N.D.
plant Norland -0.8 N.D. N.D. +0.2 N.D.
plant Atlantic -0.6 N.D. N.D. +0.1 N.D.
plant Upstate -0.1 N.D. N.D. -0.4 N.D.
plant Upstate -0.7 N.D. N.D. +0.2 N.D.
control PDB -0.2 N.D. N.D. -0.3 N.D.
plant Norland -0.8 N.D. N.D. +0.3 N.D.
carbon source M9+sucrose -0.5 N.D. N.D. +0.1 N.D.
carbon source M9+sucrose -1.0 N.D. N.D. +0.6 N.D.
control LB -0.8 N.D. N.D. +0.4 N.D.
control LB -0.5 N.D. N.D. +0.3 N.D.
plant Norland -0.4 N.D. N.D. +0.3 N.D.
carbon source M9+glycerol -0.3 N.D. N.D. +0.3 N.D.
plant Atlantic +0.0 N.D. N.D. +0.9 N.D.
carbon source M9+polygalacturonate +0.6 N.D. N.D. +0.3 N.D.
carbon source M9+sucrose +0.7 N.D. N.D. +0.3 N.D.
carbon source M9+polygalacturonate +1.1 N.D. N.D. +0.2 N.D.
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