Fitness for 5 genes in Dickeya dianthicola 67-19

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500 ntHGI48_RS00675 and HGI48_RS00680 are separated by 111 nucleotidesHGI48_RS00680 and HGI48_RS00685 are separated by 65 nucleotidesHGI48_RS00685 and HGI48_RS00690 are separated by 108 nucleotidesHGI48_RS00690 and HGI48_RS00695 overlap by 32 nucleotides HGI48_RS00675: HGI48_RS00675 - ribonuclease PH, at 158,964 to 159,680 _RS00675 HGI48_RS00680: HGI48_RS00680 - orotate phosphoribosyltransferase, at 159,792 to 160,433 _RS00680 HGI48_RS00685: HGI48_RS00685 - nucleoid occlusion factor SlmA, at 160,499 to 161,095 _RS00685 HGI48_RS00690: HGI48_RS00690 - dUTP diphosphatase, at 161,204 to 161,662 _RS00690 HGI48_RS00695: HGI48_RS00695 - bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC, at 161,631 to 162,887 _RS00695
Group Condition HGI48_RS00675 HGI48_RS00680 HGI48_RS00685 HGI48_RS00690 HGI48_RS00695
carbon source M9+glycerol -0.1 -1.5 -2.4 N.D. N.D.
carbon source M9+glycerol +0.1 -2.2 -1.4 N.D. N.D.
carbon source M9+glycerol -0.4 -1.3 -1.7 N.D. N.D.
plant Norland +0.2 -2.4 -0.8 N.D. N.D.
carbon source M9+glycerol -0.2 -2.3 -0.3 N.D. N.D.
carbon source M9+sucrose +0.8 -3.0 -0.5 N.D. N.D.
carbon source M9+glycerol -0.2 -2.2 -0.2 N.D. N.D.
plant Upstate -0.0 -1.9 -0.7 N.D. N.D.
plant Upstate -0.5 -1.3 -0.9 N.D. N.D.
plant Norland -0.0 -1.8 -0.8 N.D. N.D.
plant Atlantic -0.2 -2.7 +0.3 N.D. N.D.
plant Norland -0.3 -1.8 -0.4 N.D. N.D.
plant Norland +0.0 -2.2 -0.3 N.D. N.D.
plant Norland +0.0 -1.7 -0.9 N.D. N.D.
plant Norland +0.4 -2.5 -0.4 N.D. N.D.
carbon source M9+sucrose +0.4 -1.6 -1.0 N.D. N.D.
plant Upstate +0.2 -1.0 -1.2 N.D. N.D.
plant Upstate +0.0 -1.2 -0.8 N.D. N.D.
plant Atlantic +0.2 -1.5 -0.6 N.D. N.D.
carbon source M9+glycerol +0.0 -1.6 -0.1 N.D. N.D.
plant Atlantic +0.2 -1.5 -0.2 N.D. N.D.
plant Upstate -0.1 -1.4 -0.1 N.D. N.D.
carbon source M9+polygalacturonate +0.7 -2.6 +0.3 N.D. N.D.
plant Atlantic +0.3 -1.3 -0.5 N.D. N.D.
control LB -0.2 -0.5 -0.8 N.D. N.D.
carbon source M9+sucrose +0.7 -2.7 +0.7 N.D. N.D.
plant Atlantic +0.3 +0.0 -1.3 N.D. N.D.
plant Atlantic +0.5 -1.3 +0.0 N.D. N.D.
carbon source M9+polygalacturonate +1.2 -1.4 +0.6 N.D. N.D.
carbon source M9+polygalacturonate +1.0 -0.7 +1.1 N.D. N.D.
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HGI48_RS00675
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HGI48_RS00680
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HGI48_RS00695
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