Fitness for 5 genes in Dickeya dianthicola 67-19

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500 ntHGI48_RS00615 and HGI48_RS00620 overlap by 19 nucleotidesHGI48_RS00620 and HGI48_RS00625 are separated by 53 nucleotidesHGI48_RS00625 and HGI48_RS00630 are separated by 32 nucleotidesHGI48_RS00630 and HGI48_RS00635 are separated by 11 nucleotides HGI48_RS00615: HGI48_RS00615 - HlyD family efflux transporter periplasmic adaptor subunit, at 146,114 to 147,376 _RS00615 HGI48_RS00620: HGI48_RS00620 - isoaspartyl peptidase/L-asparaginase, at 147,358 to 148,326 _RS00620 HGI48_RS00625: HGI48_RS00625 - M55 family metallopeptidase, at 148,380 to 149,201 _RS00625 HGI48_RS00630: HGI48_RS00630 - P1 family peptidase, at 149,234 to 150,289 _RS00630 HGI48_RS00635: HGI48_RS00635 - ABC transporter permease subunit, at 150,301 to 151,200 _RS00635
Group Condition HGI48_RS00615 HGI48_RS00620 HGI48_RS00625 HGI48_RS00630 HGI48_RS00635
plant Atlantic +0.1 +0.4 -0.8 -1.4 -0.3
plant Norland -0.3 -0.5 -0.2 -0.5 -0.1
plant Norland -0.1 -0.8 -0.3 +0.1 -0.3
carbon source M9+glycerol -0.1 -1.3 +0.1 -0.0 -0.0
carbon source M9+glycerol -0.2 -0.5 -0.2 -0.6 +0.2
plant Atlantic -0.3 -1.1 +0.1 -0.1 +0.2
plant Upstate -0.1 -0.5 -0.3 -0.3 +0.1
carbon source M9+glycerol -0.3 -0.7 -0.2 -0.1 +0.2
plant Norland +0.1 -1.5 -0.0 +0.0 +0.3
plant Upstate -0.3 -0.2 -0.4 -0.2 +0.1
control LB -0.0 -0.5 +0.1 -0.6 -0.0
carbon source M9+glycerol +0.0 -0.1 -0.3 -0.6 -0.0
plant Upstate -0.2 -0.5 -0.2 -0.1 -0.0
control PDB -0.1 -0.6 -0.1 -0.1 +0.1
plant Atlantic -0.0 -0.2 -0.4 -0.2 +0.0
carbon source M9+glycerol -0.0 -0.3 -0.2 -0.3 +0.1
plant Atlantic -0.2 -0.1 -0.4 -0.0 +0.1
control PDB -0.1 +0.1 -0.3 -0.4 +0.1
plant Norland -0.2 -0.4 +0.2 +0.1 -0.1
plant Atlantic -0.0 -0.3 -0.1 +0.1 +0.2
carbon source M9+glycerol -0.2 -0.5 -0.2 +0.5 +0.1
control PDB -0.2 +0.0 -0.2 +0.3 -0.1
plant Norland +0.1 -0.6 +0.0 +0.2 +0.2
carbon source M9+sucrose -0.1 -0.1 +0.0 -0.3 +0.4
carbon source M9+polygalacturonate -0.0 -0.3 -0.1 +0.6 -0.2
control PDB -0.0 +0.2 -0.1 -0.3 +0.2
carbon source M9+sucrose -0.1 -0.2 -0.1 +1.0 +0.0
carbon source M9+sucrose +0.1 +0.5 +0.2 +0.1 +0.0
carbon source M9+polygalacturonate +0.2 +0.7 -0.3 +0.2 +0.2
plant Atlantic -0.2 +1.5 +0.1 +0.1 +0.2
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