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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola 67-19
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HGI48_RS00570 and HGI48_RS00575 overlap by 4 nucleotides
HGI48_RS00575 and HGI48_RS00580 overlap by 4 nucleotides
HGI48_RS00580 and HGI48_RS00585 are separated by 147 nucleotides
HGI48_RS00585 and HGI48_RS00590 are separated by 527 nucleotides
HGI48_RS00570: HGI48_RS00570 - ABC transporter ATP-binding protein, at 136,223 to 137,053
_RS00570
HGI48_RS00575: HGI48_RS00575 - ABC transporter ATP-binding protein, at 137,050 to 137,790
_RS00575
HGI48_RS00580: HGI48_RS00580 - beta-lactamase family protein, at 137,787 to 139,298
_RS00580
HGI48_RS00585: HGI48_RS00585 - sulfotransferase family 2 domain-containing protein, at 139,446 to 140,771
_RS00585
HGI48_RS00590: HGI48_RS00590 - hypothetical protein, at 141,299 to 141,736
_RS00590
Group
Condition
HGI48
_RS00570
HGI48
_RS00575
HGI48
_RS00580
HGI48
_RS00585
HGI48
_RS00590
plant
Norland
-0.8
+0.1
-0.1
+0.2
-0.1
plant
Norland
-0.7
+0.2
-0.4
+0.4
-0.3
carbon source
M9+glycerol
-0.2
+0.2
-0.3
-0.2
+0.0
plant
Atlantic
-0.4
+0.1
-0.4
+0.4
-0.0
carbon source
M9+glycerol
-0.2
+0.1
+0.1
+0.0
-0.5
control
PDB
-0.0
+0.1
-0.2
+0.1
-0.3
plant
Atlantic
-0.5
-0.0
-0.1
+0.2
+0.1
plant
Norland
+0.0
+0.1
-0.4
+0.2
-0.2
plant
Upstate
+0.0
+0.1
-0.2
+0.1
-0.3
carbon source
M9+sucrose
+0.1
-0.1
+0.0
-0.3
-0.1
carbon source
M9+sucrose
+0.4
-0.1
-0.2
-0.2
-0.2
control
PDB
+0.6
+0.1
-0.3
-0.1
-0.3
control
LB
-0.2
+0.0
+0.1
+0.2
-0.2
plant
Upstate
-0.1
+0.2
-0.2
+0.3
-0.2
carbon source
M9+polygalacturonate
-0.1
+0.2
-0.3
-0.3
+0.4
plant
Atlantic
+0.1
+0.2
-0.3
+0.0
-0.0
control
PDB
+0.0
+0.1
-0.2
+0.1
+0.1
carbon source
M9+sucrose
+0.4
+0.1
-0.1
-0.1
-0.1
carbon source
M9+glycerol
+0.2
+0.1
+0.1
-0.0
-0.2
plant
Upstate
-0.0
+0.2
+0.1
-0.0
-0.1
carbon source
M9+polygalacturonate
+0.2
+0.2
-0.2
-0.1
+0.0
plant
Atlantic
+0.2
-0.0
+0.2
+0.1
-0.3
plant
Norland
+0.2
+0.1
-0.2
+0.2
-0.1
plant
Upstate
+0.1
-0.1
-0.1
+0.3
+0.0
carbon source
M9+polygalacturonate
+0.2
+0.2
+0.2
-0.3
-0.1
control
PDB
+0.2
-0.0
+0.0
+0.2
-0.1
plant
Norland
+0.1
+0.1
-0.1
+0.1
+0.2
plant
Atlantic
+0.5
-0.1
-0.1
+0.1
+0.0
plant
Atlantic
+0.3
+0.1
-0.1
+0.3
+0.2
carbon source
M9+glycerol
+0.4
+0.3
+0.1
+0.2
-0.0
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