Fitness for 5 genes in Dickeya dianthicola 67-19

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500 ntHGI48_RS00535 and HGI48_RS00540 are separated by 167 nucleotidesHGI48_RS00540 and HGI48_RS00545 are separated by 129 nucleotidesHGI48_RS00545 and HGI48_RS00550 are separated by 127 nucleotidesHGI48_RS00550 and HGI48_RS00555 are separated by 200 nucleotides HGI48_RS00535: HGI48_RS00535 - helix-turn-helix transcriptional regulator, at 128,885 to 129,238 _RS00535 HGI48_RS00540: HGI48_RS00540 - YicC family protein, at 129,406 to 130,269 _RS00540 HGI48_RS00545: HGI48_RS00545 - LysR family transcriptional regulator, at 130,399 to 131,307 _RS00545 HGI48_RS00550: HGI48_RS00550 - dipeptidase, at 131,435 to 132,517 _RS00550 HGI48_RS00555: HGI48_RS00555 - ABC transporter substrate-binding protein, at 132,718 to 134,313 _RS00555
Group Condition HGI48_RS00535 HGI48_RS00540 HGI48_RS00545 HGI48_RS00550 HGI48_RS00555
plant Atlantic -0.9 -0.5 -0.3 +0.6 -0.4
plant Atlantic -0.1 -0.7 -0.3 -0.2 +0.2
plant Atlantic -0.4 +0.1 -0.2 -0.1 +0.1
plant Upstate +0.0 -0.8 +0.2 +0.1 +0.1
plant Norland +0.0 -0.3 -0.2 -0.0 +0.3
plant Upstate +0.2 +0.2 -0.3 -0.2 +0.0
plant Atlantic -0.2 +0.2 -0.1 -0.1 +0.2
carbon source M9+glycerol -0.1 +0.5 +0.1 -0.5 +0.1
control LB -0.4 +0.1 +0.1 +0.3 +0.0
plant Upstate -0.1 +0.4 -0.2 +0.1 +0.0
control PDB -0.3 +0.6 +0.1 -0.2 +0.2
control PDB -0.1 +0.8 +0.0 +0.1 -0.1
carbon source M9+glycerol +0.1 +0.7 -0.0 +0.0 -0.1
carbon source M9+polygalacturonate +0.0 +1.1 -0.7 +0.1 +0.3
plant Norland +0.6 +0.2 -0.4 -0.1 +0.3
carbon source M9+glycerol -0.3 +0.8 +0.0 +0.2 +0.1
plant Norland +0.2 +0.3 -0.1 +0.1 +0.2
control PDB -0.1 +1.1 +0.2 -0.2 -0.0
carbon source M9+glycerol +0.1 +0.8 +0.3 -0.1 -0.3
control PDB +0.2 +0.7 +0.2 -0.2 +0.1
carbon source M9+glycerol -0.2 +0.6 -0.3 +0.6 +0.3
control PDB -0.1 +1.0 +0.1 -0.0 +0.1
carbon source M9+glycerol +0.2 +0.7 +0.2 -0.2 +0.2
plant Atlantic +0.5 +0.5 -0.4 +0.4 +0.2
plant Atlantic +0.4 +0.4 +0.2 +0.2 +0.4
carbon source M9+sucrose -0.0 +1.8 -0.3 -0.2 +0.4
carbon source M9+polygalacturonate -0.3 +1.7 +0.0 +0.4 -0.0
carbon source M9+polygalacturonate -0.5 +2.1 -0.0 +0.3 +0.0
carbon source M9+sucrose -0.2 +2.1 -0.1 +0.1 +0.2
carbon source M9+sucrose -0.1 +2.5 -0.2 +0.9 +0.1
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