Fitness for 5 genes in Dickeya dianthicola 67-19

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500 ntHGI48_RS00400 and HGI48_RS00405 overlap by 14 nucleotidesHGI48_RS00405 and HGI48_RS00410 are separated by 61 nucleotidesHGI48_RS00410 and HGI48_RS00415 are separated by 647 nucleotidesHGI48_RS00415 and HGI48_RS00420 are separated by 4 nucleotides HGI48_RS00400: HGI48_RS00400 - multidrug transporter, at 101,698 to 101,883 _RS00400 HGI48_RS00405: HGI48_RS00405 - alpha/beta hydrolase, at 101,870 to 102,958 _RS00405 HGI48_RS00410: HGI48_RS00410 - AraC family transcriptional regulator VfmE, at 103,020 to 103,583 _RS00410 HGI48_RS00415: HGI48_RS00415 - ABC transporter ATP-binding protein, at 104,231 to 104,938 _RS00415 HGI48_RS00420: HGI48_RS00420 - ABC transporter permease, at 104,943 to 107,378 _RS00420
Group Condition HGI48_RS00400 HGI48_RS00405 HGI48_RS00410 HGI48_RS00415 HGI48_RS00420
control LB N.D. +0.1 +0.1 -0.2 -0.5
control LB N.D. +0.0 -0.0 +0.2 -0.6
control LB N.D. +0.0 +0.0 +0.3 -0.7
plant Atlantic N.D. -0.1 +0.1 +0.4 -0.5
plant Upstate N.D. +0.0 +0.2 +0.4 -0.2
plant Norland N.D. -0.1 +0.3 +0.5 -0.2
plant Atlantic N.D. -0.1 +0.6 +0.6 -0.6
plant Upstate N.D. +0.3 +0.3 +0.3 -0.2
plant Norland N.D. +0.0 +0.4 +0.4 -0.2
carbon source M9+polygalacturonate N.D. -0.3 +0.0 -0.0 +1.1
carbon source M9+glycerol N.D. +0.1 +0.2 +0.1 +0.5
plant Norland N.D. +0.1 +0.3 +0.7 -0.2
plant Atlantic N.D. +0.0 +0.4 +0.4 +0.1
plant Atlantic N.D. +0.2 +0.4 +0.7 -0.4
plant Atlantic N.D. +0.1 +0.5 +0.7 -0.1
carbon source M9+sucrose N.D. +0.1 +0.0 +0.5 +0.4
plant Upstate N.D. +0.1 +0.5 +0.8 -0.2
plant Upstate N.D. +0.1 +0.3 +0.6 +0.1
carbon source M9+glycerol N.D. -0.0 +0.3 +0.4 +0.5
plant Norland N.D. +0.2 +0.8 +0.3 -0.2
plant Norland N.D. +0.2 +0.6 +0.5 +0.1
carbon source M9+polygalacturonate N.D. +0.0 +0.3 +0.2 +1.1
carbon source M9+polygalacturonate N.D. -0.3 +0.1 +0.2 +1.9
carbon source M9+sucrose N.D. -0.3 +0.3 +0.7 +1.4
control PDB N.D. -0.2 +1.5 +1.3 +0.9
control PDB N.D. -0.0 +1.7 +1.3 +0.8
control PDB N.D. -0.3 +1.7 +1.5 +0.9
control PDB N.D. -0.3 +1.6 +1.6 +1.0
control PDB N.D. -0.0 +1.5 +1.8 +0.9
control PDB N.D. -0.1 +1.8 +1.6 +0.9
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