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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola 67-19
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HGI48_RS00215 and HGI48_RS00220 are separated by 588 nucleotides
HGI48_RS00220 and HGI48_RS00225 are separated by 339 nucleotides
HGI48_RS00225 and HGI48_RS00230 are separated by 101 nucleotides
HGI48_RS00230 and HGI48_RS00235 are separated by 2 nucleotides
HGI48_RS00215: HGI48_RS00215 - glycine--tRNA ligase subunit beta, at 53,209 to 55,278
_RS00215
HGI48_RS00220: HGI48_RS00220 - alpha/beta hydrolase, at 55,867 to 56,637
_RS00220
HGI48_RS00225: HGI48_RS00225 - urea carboxylase, at 56,977 to 60,570
_RS00225
HGI48_RS00230: HGI48_RS00230 - urea carboxylase-associated family protein, at 60,672 to 61,307
_RS00230
HGI48_RS00235: HGI48_RS00235 - urea carboxylase-associated family protein, at 61,310 to 62,029
_RS00235
Group
Condition
HGI48
_RS00215
HGI48
_RS00220
HGI48
_RS00225
HGI48
_RS00230
HGI48
_RS00235
plant
Atlantic
N.D.
+0.1
-0.3
-0.6
-0.2
control
PDB
N.D.
-0.2
-0.1
-0.0
-0.4
plant
Atlantic
N.D.
+0.2
-0.1
-0.3
-0.4
carbon source
M9+glycerol
N.D.
+0.2
-0.1
-0.5
-0.2
carbon source
M9+glycerol
N.D.
-0.1
-0.1
+0.2
-0.6
plant
Upstate
N.D.
+0.1
-0.1
-0.1
-0.5
control
LB
N.D.
+0.0
-0.2
-0.4
+0.1
plant
Norland
N.D.
+0.1
-0.1
-0.0
-0.4
carbon source
M9+glycerol
N.D.
+0.1
+0.1
-0.4
+0.0
plant
Atlantic
N.D.
+0.2
-0.2
+0.3
-0.4
plant
Norland
N.D.
+0.1
-0.2
-0.2
+0.1
plant
Norland
N.D.
+0.2
-0.1
-0.2
-0.1
control
LB
N.D.
-0.1
-0.2
+0.1
+0.1
plant
Atlantic
N.D.
+0.5
-0.0
-0.1
-0.5
plant
Upstate
N.D.
-0.1
-0.2
+0.4
-0.2
carbon source
M9+sucrose
N.D.
-0.1
-0.1
-0.2
+0.4
plant
Norland
N.D.
+0.2
-0.0
+0.1
-0.2
plant
Upstate
N.D.
+0.4
-0.1
-0.0
-0.2
carbon source
M9+glycerol
N.D.
+0.2
-0.1
-0.1
+0.1
carbon source
M9+polygalacturonate
N.D.
+0.2
-0.2
+0.2
-0.0
plant
Atlantic
N.D.
+0.2
-0.1
+0.3
-0.2
control
PDB
N.D.
+0.1
+0.1
+0.4
-0.2
control
PDB
N.D.
+0.1
-0.1
+0.3
+0.0
carbon source
M9+sucrose
N.D.
+0.1
+0.1
+0.5
-0.3
control
PDB
N.D.
-0.3
+0.1
+0.1
+0.4
carbon source
M9+sucrose
N.D.
+0.3
+0.0
+0.3
-0.2
carbon source
M9+polygalacturonate
N.D.
-0.1
+0.1
+0.4
+0.1
plant
Atlantic
N.D.
+0.1
-0.2
+0.3
+0.3
plant
Upstate
N.D.
+0.5
-0.2
+0.3
-0.0
plant
Upstate
N.D.
+0.6
+0.0
+0.2
+0.1
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