Fitness for 5 genes in Dickeya dianthicola 67-19

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500 ntHGI48_RS00170 and HGI48_RS00175 are separated by 101 nucleotidesHGI48_RS00175 and HGI48_RS00180 are separated by 656 nucleotidesHGI48_RS00180 and HGI48_RS00185 overlap by 4 nucleotidesHGI48_RS00185 and HGI48_RS00190 overlap by 4 nucleotides HGI48_RS00170: HGI48_RS00170 - aldose 1-epimerase family protein, at 43,899 to 45,107 _RS00170 HGI48_RS00175: HGI48_RS00175 - glyoxylate/hydroxypyruvate reductase GhrB, at 45,209 to 46,171 _RS00175 HGI48_RS00180: HGI48_RS00180 - RNA-directed DNA polymerase, at 46,828 to 47,766 _RS00180 HGI48_RS00185: HGI48_RS00185 - AAA family ATPase, at 47,763 to 49,421 _RS00185 HGI48_RS00190: HGI48_RS00190 - TIGR02646 family protein, at 49,418 to 50,065 _RS00190
Group Condition HGI48_RS00170 HGI48_RS00175 HGI48_RS00180 HGI48_RS00185 HGI48_RS00190
carbon source M9+sucrose -0.1 +0.1 -0.2 -0.1 -0.5
plant Norland -0.1 -0.3 -0.1 -0.1 -0.2
carbon source M9+glycerol -0.4 -0.1 -0.0 -0.1 -0.3
carbon source M9+sucrose +0.0 -0.2 -0.1 -0.4 -0.1
control LB -0.3 +0.1 -0.1 -0.2 -0.3
control LB +0.1 -0.1 -0.2 -0.1 -0.4
control PDB +0.0 -0.3 +0.0 +0.0 -0.4
plant Atlantic +0.1 -0.2 +0.1 -0.0 -0.4
control PDB -0.2 -0.2 +0.2 +0.0 -0.3
carbon source M9+polygalacturonate +0.1 -0.2 +0.0 -0.5 +0.1
carbon source M9+polygalacturonate +0.0 -0.4 +0.0 -0.3 +0.2
carbon source M9+sucrose -0.1 -0.0 -0.1 -0.2 +0.1
carbon source M9+glycerol +0.0 -0.4 +0.3 +0.0 -0.3
plant Atlantic -0.3 +0.3 -0.0 -0.1 -0.2
plant Norland -0.2 +0.2 -0.0 +0.1 -0.3
carbon source M9+glycerol -0.1 -0.1 +0.2 -0.1 -0.1
plant Atlantic +0.4 +0.2 -0.4 +0.0 -0.4
plant Upstate -0.0 -0.3 -0.2 +0.4 -0.0
control PDB +0.1 -0.1 +0.1 -0.3 +0.1
plant Upstate +0.1 +0.1 +0.2 -0.4 +0.1
plant Norland -0.2 -0.1 -0.2 +0.3 +0.3
plant Upstate -0.0 -0.2 -0.1 +0.1 +0.3
carbon source M9+polygalacturonate +0.1 -0.2 +0.2 -0.2 +0.2
carbon source M9+glycerol -0.0 -0.1 +0.4 +0.2 -0.3
plant Upstate +0.2 -0.1 -0.1 +0.3 -0.1
plant Upstate -0.1 +0.2 -0.1 +0.2 +0.1
plant Norland +0.1 +0.2 -0.0 -0.2 +0.1
carbon source M9+glycerol +0.1 +0.1 +0.1 +0.2 -0.3
control PDB +0.2 +0.2 +0.1 +0.1 -0.2
plant Atlantic +0.8 +0.3 +0.1 -0.1 -0.1
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