Fitness for 5 genes in Dickeya dianthicola 67-19

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500 ntHGI48_RS00095 and HGI48_RS00100 are separated by 5 nucleotidesHGI48_RS00100 and HGI48_RS00105 are separated by 38 nucleotidesHGI48_RS00105 and HGI48_RS00110 are separated by 53 nucleotidesHGI48_RS00110 and HGI48_RS00115 are separated by 590 nucleotides HGI48_RS00095: HGI48_RS00095 - PAS domain-containing protein, at 25,560 to 25,997 _RS00095 HGI48_RS00100: HGI48_RS00100 - formyl-CoA transferase, at 26,003 to 27,280 _RS00100 HGI48_RS00105: HGI48_RS00105 - oxalyl-CoA decarboxylase, at 27,319 to 29,064 _RS00105 HGI48_RS00110: HGI48_RS00110 - OFA family MFS transporter, at 29,118 to 30,425 _RS00110 HGI48_RS00115: HGI48_RS00115 - LysR family transcriptional regulator, at 31,016 to 31,912 _RS00115
Group Condition HGI48_RS00095 HGI48_RS00100 HGI48_RS00105 HGI48_RS00110 HGI48_RS00115
carbon source M9+polygalacturonate -3.7 +0.0 -0.1 -0.1 -0.2
plant Atlantic -3.4 +0.3 +0.4 +0.4 -0.1
carbon source M9+glycerol -1.9 +0.2 -0.3 +0.1 -0.4
carbon source M9+polygalacturonate -1.1 -0.1 -0.2 +0.0 -0.4
control LB -1.5 +0.1 -0.1 +0.1 -0.0
plant Norland -0.8 +0.1 +0.0 -0.3 -0.4
plant Upstate -1.3 +0.1 -0.0 -0.1 -0.1
control PDB -0.5 +0.0 -0.0 -0.6 -0.2
control LB -0.7 -0.0 -0.0 -0.2 -0.3
plant Atlantic -0.7 +0.0 -0.1 +0.0 -0.4
carbon source M9+glycerol -0.1 -0.0 -0.2 -0.3 -0.4
control PDB -0.9 +0.0 +0.2 -0.1 -0.2
carbon source M9+polygalacturonate -0.4 -0.1 -0.1 -0.2 -0.0
plant Upstate -0.9 -0.0 -0.1 +0.1 +0.1
control LB -0.7 +0.1 -0.0 +0.0 -0.1
plant Norland -0.6 -0.1 -0.1 +0.1 -0.1
carbon source M9+glycerol -1.0 -0.0 +0.2 -0.0 +0.1
control PDB -0.3 +0.0 +0.1 -0.3 -0.3
control PDB -0.1 +0.0 +0.1 -0.5 -0.2
plant Norland -1.0 +0.1 -0.1 +0.2 +0.2
plant Upstate -0.4 +0.2 -0.0 -0.1 -0.2
plant Atlantic +0.3 -0.1 +0.1 -0.5 -0.2
control LB -0.4 -0.1 +0.1 -0.1 +0.1
carbon source M9+sucrose +0.3 +0.1 -0.2 -0.5 +0.1
plant Atlantic +0.2 -0.1 -0.2 +0.3 -0.1
carbon source M9+glycerol +0.7 +0.1 -0.4 -0.2 -0.0
plant Atlantic +0.1 +0.1 +0.3 +0.2 -0.4
plant Norland +0.4 -0.0 +0.2 -0.1 -0.1
carbon source M9+sucrose +0.9 -0.1 -0.0 -0.2 -0.1
plant Norland +0.7 +0.1 +0.1 -0.0 -0.1
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