Fitness for 5 genes in Dickeya dianthicola 67-19

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500 ntHGI48_RS00080 and HGI48_RS00085 are separated by 103 nucleotidesHGI48_RS00085 and HGI48_RS00090 are separated by 464 nucleotidesHGI48_RS00090 and HGI48_RS00095 are separated by 93 nucleotidesHGI48_RS00095 and HGI48_RS00100 are separated by 5 nucleotides HGI48_RS00080: HGI48_RS00080 - hypothetical protein, at 22,311 to 23,525 _RS00080 HGI48_RS00085: HGI48_RS00085 - IS3 family transposase, at 23,629 to 23,754 _RS00085 HGI48_RS00090: HGI48_RS00090 - formyl-CoA transferase, at 24,219 to 25,466 _RS00090 HGI48_RS00095: HGI48_RS00095 - PAS domain-containing protein, at 25,560 to 25,997 _RS00095 HGI48_RS00100: HGI48_RS00100 - formyl-CoA transferase, at 26,003 to 27,280 _RS00100
Group Condition HGI48_RS00080 HGI48_RS00085 HGI48_RS00090 HGI48_RS00095 HGI48_RS00100
carbon source M9+polygalacturonate +0.1 N.D. +0.1 -3.7 +0.0
plant Atlantic +0.1 N.D. +0.3 -3.4 +0.3
carbon source M9+glycerol +0.0 N.D. -0.2 -1.9 +0.2
carbon source M9+polygalacturonate +0.0 N.D. -0.2 -1.1 -0.1
control LB +0.1 N.D. -0.1 -1.5 +0.1
plant Upstate -0.1 N.D. +0.1 -1.3 +0.1
control PDB -0.1 N.D. -0.2 -0.9 +0.0
carbon source M9+glycerol +0.1 N.D. -0.1 -1.0 -0.0
carbon source M9+polygalacturonate -0.1 N.D. -0.3 -0.4 -0.1
plant Upstate +0.1 N.D. -0.1 -0.9 -0.0
plant Norland +0.0 N.D. +0.1 -1.0 +0.1
plant Norland -0.2 N.D. +0.0 -0.8 +0.1
control LB -0.2 N.D. -0.1 -0.4 -0.1
control LB -0.1 N.D. -0.1 -0.7 +0.1
plant Norland -0.0 N.D. -0.0 -0.6 -0.1
control PDB -0.2 N.D. -0.0 -0.5 +0.0
control PDB -0.3 N.D. -0.0 -0.3 +0.0
control LB +0.2 N.D. +0.1 -0.7 -0.0
plant Atlantic -0.0 N.D. +0.2 -0.7 +0.0
plant Atlantic -0.2 N.D. -0.2 +0.2 -0.1
plant Upstate +0.2 N.D. -0.3 -0.2 -0.0
plant Upstate -0.0 N.D. -0.1 -0.4 +0.2
carbon source M9+glycerol +0.1 N.D. -0.2 -0.2 +0.1
plant Norland +0.4 N.D. -0.1 +0.1 -0.0
plant Atlantic +0.2 N.D. -0.0 +0.3 -0.1
plant Norland +0.1 N.D. -0.1 +0.4 -0.0
carbon source M9+glycerol -0.0 N.D. -0.1 +0.7 +0.1
carbon source M9+sucrose +0.0 N.D. -0.2 +0.9 -0.1
carbon source M9+sucrose -0.0 N.D. +0.3 +0.3 +0.1
plant Norland +0.2 N.D. -0.0 +0.7 +0.1
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