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Cofit
Protein
Homologs
Fitness for 5 genes in
Pectobacterium carotovorum WPP14
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HER17_RS21805 and HER17_RS21810 are separated by 182 nucleotides
HER17_RS21810 and HER17_RS21815 are separated by 2 nucleotides
HER17_RS21815 and HER17_RS21820 are separated by 6 nucleotides
HER17_RS21820 and HER17_RS22025 are separated by 371 nucleotides
HER17_RS21805: HER17_RS21805 - HipA N-terminal domain-containing protein, at 4,882,804 to 4,883,328
_RS21805
HER17_RS21810: HER17_RS21810 - RES family NAD+ phosphorylase, at 4,883,511 to 4,884,533
_RS21810
HER17_RS21815: HER17_RS21815 - sce7725 family protein, at 4,884,536 to 4,885,468
_RS21815
HER17_RS21820: HER17_RS21820 - sce7726 family protein, at 4,885,475 to 4,886,362
_RS21820
HER17_RS22025: HER17_RS22025 - tyrosine-type recombinase/integrase, at 4,886,734 to 4,887,523
_RS22025
Group
Condition
HER17
_RS21805
HER17
_RS21810
HER17
_RS21815
HER17
_RS21820
HER17
_RS22025
carbon source
M9+glucose
-0.4
-0.1
+0.0
-1.1
-0.2
carbon source
M9+glycerol
-0.2
-0.6
-0.1
-0.4
-0.1
carbon source
M9+glycerol
-0.2
-0.4
-0.6
+0.1
-0.1
control
LB
-0.3
-0.4
-0.1
-0.3
-0.1
control
LB
-0.1
-0.3
-0.2
-0.4
-0.1
plant
Tuber-Atlantic
-0.3
+0.0
-0.8
+0.1
+0.1
carbon source
M9+glycerol
-0.1
-0.1
-0.5
+0.0
-0.1
control
LB
-0.0
-0.2
-0.3
-0.3
-0.0
carbon source
M9+glycerol
-0.1
+0.0
-0.1
-0.5
-0.1
carbon source
M9+glycerol
-0.2
-0.4
-0.3
+0.3
-0.1
carbon source
M9+glycerol
-0.0
-0.4
+0.0
-0.2
-0.1
control
LB
-0.0
-0.2
-0.2
-0.1
-0.0
plant
Tuber-Atlantic
-0.2
-0.3
-0.1
+0.1
-0.1
control
LB
-0.1
-0.2
-0.2
-0.1
-0.1
carbon source
M9+starch
-0.1
-0.0
-0.6
+0.1
+0.1
control
LB
+0.1
-0.0
-0.2
-0.1
-0.1
carbon source
M9+sucrose
+0.1
+0.3
-0.8
+0.4
+0.0
carbon source
M9+polygalacturonate
-0.1
+0.3
-0.2
+0.0
-0.1
carbon source
M9+glucose+arginine
+0.4
+0.2
-0.1
-0.4
+0.0
carbon source
M9+polygalacturonate
+0.2
-0.2
-0.0
+0.2
+0.0
carbon source
M9+polygalacturonate
-0.2
+0.0
-0.1
+0.5
-0.0
carbon source
M9+glucose+arginine
-0.1
+0.1
-0.1
+0.5
-0.0
carbon source
M9+glucose
+0.1
-0.2
-0.0
+0.5
+0.1
carbon source
M9+sucrose
-0.1
+0.2
-0.1
+0.6
+0.0
carbon source
M9+glucose
+0.1
+0.6
+0.1
-0.1
-0.0
carbon source
M9+starch
-0.1
-0.1
+0.2
+0.7
+0.0
carbon source
M9+starch
-0.0
+0.0
+0.0
+0.6
+0.0
plant
Tuber-Atlantic
+0.3
-0.1
-0.5
+1.1
+0.1
plant
Tuber-Atlantic
-0.1
+0.5
-0.4
+1.1
-0.0
carbon source
M9+glucose+arginine
+0.2
+0.3
+0.4
+0.6
+0.2
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HER17_RS21815
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