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Cofit
Protein
Homologs
Fitness for 5 genes in
Pectobacterium carotovorum WPP14
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HER17_RS21730 and HER17_RS21735 are separated by 184 nucleotides
HER17_RS21735 and HER17_RS21740 are separated by 256 nucleotides
HER17_RS21740 and HER17_RS21745 are separated by 55 nucleotides
HER17_RS21745 and HER17_RS21750 are separated by 189 nucleotides
HER17_RS21730: HER17_RS21730 - amino acid ABC transporter permease, at 4,869,252 to 4,869,980
_RS21730
HER17_RS21735: HER17_RS21735 - 6-phosphogluconate phosphatase, at 4,870,165 to 4,870,830
_RS21735
HER17_RS21740: HER17_RS21740 - NCS2 family permease, at 4,871,087 to 4,872,424
_RS21740
HER17_RS21745: HER17_RS21745 - hypothetical protein, at 4,872,480 to 4,873,223
_RS21745
HER17_RS21750: HER17_RS21750 - 4Fe-4S dicluster domain-containing protein, at 4,873,413 to 4,873,934
_RS21750
Group
Condition
HER17
_RS21730
HER17
_RS21735
HER17
_RS21740
HER17
_RS21745
HER17
_RS21750
carbon source
M9+polygalacturonate
+0.0
+0.0
-0.1
-1.3
N.D.
carbon source
M9+glucose+arginine
+0.1
-0.0
-0.1
-0.9
N.D.
carbon source
M9+polygalacturonate
+0.1
+0.0
+0.1
-1.2
N.D.
carbon source
M9+glucose
+0.0
-0.1
-0.2
-0.6
N.D.
plant
Tuber-Atlantic
+0.1
-0.3
+0.2
-0.8
N.D.
carbon source
M9+polygalacturonate
+0.2
+0.1
+0.1
-1.3
N.D.
plant
Tuber-Atlantic
+0.2
+0.2
-0.0
-1.1
N.D.
carbon source
M9+glucose
+0.2
+0.0
-0.2
-0.6
N.D.
carbon source
M9+starch
+0.0
-0.2
-0.2
-0.3
N.D.
carbon source
M9+glucose+arginine
+0.0
+0.1
-0.2
-0.5
N.D.
control
LB
-0.0
-0.2
+0.1
-0.3
N.D.
carbon source
M9+glucose
+0.1
+0.2
-0.3
-0.5
N.D.
carbon source
M9+starch
-0.0
+0.1
-0.1
-0.4
N.D.
plant
Tuber-Atlantic
+0.3
-0.2
+0.1
-0.5
N.D.
control
LB
-0.0
-0.1
-0.1
-0.1
N.D.
carbon source
M9+sucrose
+0.0
+0.2
-0.0
-0.3
N.D.
carbon source
M9+starch
+0.2
+0.1
-0.2
-0.2
N.D.
control
LB
-0.1
-0.1
-0.1
+0.2
N.D.
carbon source
M9+sucrose
+0.0
+0.2
-0.1
-0.2
N.D.
control
LB
+0.1
-0.1
-0.1
+0.1
N.D.
carbon source
M9+glucose+arginine
+0.3
+0.3
-0.1
-0.5
N.D.
carbon source
M9+glycerol
-0.2
+0.0
-0.1
+0.2
N.D.
carbon source
M9+glycerol
+0.1
-0.1
-0.1
+0.1
N.D.
carbon source
M9+sucrose
+0.3
+0.1
-0.1
-0.1
N.D.
control
LB
+0.2
-0.1
-0.1
+0.1
N.D.
carbon source
M9+glycerol
+0.0
-0.1
+0.1
+0.2
N.D.
carbon source
M9+glycerol
+0.1
-0.1
+0.0
+0.3
N.D.
carbon source
M9+glycerol
-0.0
-0.1
+0.0
+0.3
N.D.
carbon source
M9+glycerol
+0.1
-0.1
-0.1
+0.5
N.D.
plant
Tuber-Atlantic
+0.5
-0.0
+0.2
+0.4
N.D.
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HER17_RS21740
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