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Cofit
Protein
Homologs
Fitness for 5 genes in
Pectobacterium carotovorum WPP14
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HER17_RS21440 and HER17_RS21445 are separated by 143 nucleotides
HER17_RS21445 and HER17_RS21450 are separated by 59 nucleotides
HER17_RS21450 and HER17_RS21455 are separated by 147 nucleotides
HER17_RS21455 and HER17_RS21460 are separated by 3 nucleotides
HER17_RS21440: HER17_RS21440 - nitrogen regulation protein NR(I), at 4,807,213 to 4,808,625
_RS21440
HER17_RS21445: HER17_RS21445 - YshB family small membrane protein, at 4,808,769 to 4,808,891
_RS21445
HER17_RS21450: HER17_RS21450 - oxygen-independent coproporphyrinogen III oxidase, at 4,808,951 to 4,810,324
_RS21450
HER17_RS21455: HER17_RS21455 - hypothetical protein, at 4,810,472 to 4,810,642
_RS21455
HER17_RS21460: HER17_RS21460 - Der GTPase-activating protein YihI, at 4,810,646 to 4,811,200
_RS21460
Group
Condition
HER17
_RS21440
HER17
_RS21445
HER17
_RS21450
HER17
_RS21455
HER17
_RS21460
carbon source
M9+glucose+arginine
-1.2
-0.6
-0.3
-0.4
-0.4
carbon source
M9+glucose+arginine
-1.8
+0.0
-0.3
-0.2
-0.5
carbon source
M9+glucose+arginine
-1.7
+0.6
-0.4
-0.2
-0.0
carbon source
M9+glucose
-0.9
-1.2
-0.3
+0.0
+0.7
carbon source
M9+glucose
-1.3
+0.0
-0.4
-0.4
+0.4
plant
Tuber-Atlantic
-0.1
-0.8
-1.0
+0.3
+0.1
control
LB
-0.2
-0.5
-0.1
-0.2
-0.3
plant
Tuber-Atlantic
+0.1
-0.4
-1.0
-0.1
+0.2
carbon source
M9+glucose
-1.0
+0.3
-0.3
-0.1
+0.0
carbon source
M9+sucrose
-0.5
-0.4
-0.0
+0.0
-0.3
carbon source
M9+glycerol
-0.1
-0.2
-0.2
-0.3
-0.3
control
LB
-0.1
-0.5
-0.1
+0.1
-0.3
carbon source
M9+glycerol
-0.0
-0.1
-0.0
-0.2
-0.6
carbon source
M9+polygalacturonate
-0.5
-0.8
-0.0
+0.0
+0.3
carbon source
M9+starch
-0.3
-0.6
-0.1
-0.1
+0.1
plant
Tuber-Atlantic
-0.4
-0.4
-0.4
+1.0
-0.6
control
LB
-0.3
-0.1
-0.1
-0.2
+0.0
carbon source
M9+sucrose
-0.7
-0.2
-0.0
-0.1
+0.4
carbon source
M9+glycerol
-0.0
-0.1
+0.0
-0.1
-0.2
control
LB
-0.2
+0.1
-0.1
-0.2
+0.0
carbon source
M9+starch
-0.4
-0.1
-0.0
-0.0
+0.2
carbon source
M9+glycerol
-0.0
+0.1
+0.0
-0.2
-0.2
carbon source
M9+polygalacturonate
-0.5
-0.2
-0.0
+0.1
+0.3
plant
Tuber-Atlantic
+0.0
+0.5
-0.8
+0.1
+0.0
carbon source
M9+sucrose
-0.6
+0.1
-0.0
+0.2
+0.1
carbon source
M9+starch
-0.3
-0.3
-0.0
+0.1
+0.4
control
LB
-0.3
+0.4
-0.1
+0.1
+0.1
carbon source
M9+glycerol
+0.1
-0.2
-0.0
+0.2
+0.1
control
LB
-0.1
+0.4
-0.1
-0.0
+0.1
carbon source
M9+polygalacturonate
-0.5
+0.3
-0.1
+0.1
+0.7
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