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Protein
Homologs
Fitness for 5 genes in
Pectobacterium carotovorum WPP14
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HER17_RS21315 and HER17_RS21320 are separated by 174 nucleotides
HER17_RS21320 and HER17_RS21325 are separated by 291 nucleotides
HER17_RS21325 and HER17_RS21330 are separated by 553 nucleotides
HER17_RS21330 and HER17_RS21335 are separated by 199 nucleotides
HER17_RS21315: HER17_RS21315 - FAD-binding oxidoreductase, at 4,774,694 to 4,776,007
_RS21315
HER17_RS21320: HER17_RS21320 - NADP-specific glutamate dehydrogenase, at 4,776,182 to 4,777,525
_RS21320
HER17_RS21325: HER17_RS21325 - universal stress protein UspA, at 4,777,817 to 4,778,254
_RS21325
HER17_RS21330: HER17_RS21330 - universal stress protein UspB, at 4,778,808 to 4,779,143
_RS21330
HER17_RS21335: HER17_RS21335 - inorganic phosphate transporter PitA, at 4,779,343 to 4,780,848
_RS21335
Group
Condition
HER17
_RS21315
HER17
_RS21320
HER17
_RS21325
HER17
_RS21330
HER17
_RS21335
carbon source
M9+polygalacturonate
-0.1
-0.6
+0.0
-0.1
-1.6
plant
Tuber-Atlantic
+0.1
-0.5
-0.3
+0.2
-1.6
carbon source
M9+polygalacturonate
-0.1
-0.1
+0.0
-0.2
-1.6
plant
Tuber-Atlantic
-0.1
+0.2
-0.2
+0.1
-1.8
carbon source
M9+polygalacturonate
+0.0
-0.4
+0.1
-0.1
-1.4
carbon source
M9+sucrose
-0.1
-0.2
-0.1
-0.0
-1.3
control
LB
-0.1
-0.2
-0.1
+0.1
-1.3
control
LB
-0.1
-0.3
-0.0
-0.0
-1.2
plant
Tuber-Atlantic
+0.1
+0.1
-0.4
+0.4
-1.7
carbon source
M9+glucose
-0.1
-0.3
+0.2
+0.4
-1.7
control
LB
-0.0
-0.3
-0.1
+0.3
-1.4
carbon source
M9+sucrose
-0.1
-0.1
-0.2
-0.1
-1.0
carbon source
M9+sucrose
-0.1
-0.1
-0.1
-0.1
-0.8
carbon source
M9+glucose+arginine
-0.1
-0.1
+0.2
+0.3
-1.6
carbon source
M9+starch
-0.1
-0.1
-0.1
+0.0
-1.1
carbon source
M9+glucose+arginine
-0.1
-0.1
-0.0
+0.3
-1.3
carbon source
M9+starch
+0.0
-0.2
-0.0
-0.2
-0.8
control
LB
-0.0
-0.2
-0.1
+0.2
-1.0
control
LB
+0.0
-0.2
+0.1
+0.3
-1.0
carbon source
M9+glucose
-0.2
-0.3
+0.3
+0.4
-1.0
carbon source
M9+glucose+arginine
-0.0
+0.1
+0.2
+0.5
-1.5
carbon source
M9+starch
-0.1
-0.0
+0.1
-0.0
-0.7
control
LB
-0.1
-0.0
+0.2
+0.1
-0.9
carbon source
M9+glucose
+0.0
-0.1
+0.3
+0.4
-1.3
carbon source
M9+glycerol
+0.1
-0.3
-0.2
+0.1
-0.2
plant
Tuber-Atlantic
+0.3
+0.7
-0.1
+0.3
-1.6
carbon source
M9+glycerol
+0.0
+0.0
-0.1
+0.0
-0.4
carbon source
M9+glycerol
-0.0
-0.1
-0.0
+0.1
-0.2
carbon source
M9+glycerol
-0.0
-0.3
+0.1
+0.2
-0.2
carbon source
M9+glycerol
-0.1
+0.0
+0.1
+0.2
+0.1
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