Fitness for 5 genes in Pectobacterium carotovorum WPP14

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500 ntHER17_RS21285 and HER17_RS21290 overlap by 4 nucleotidesHER17_RS21290 and HER17_RS21295 are separated by 181 nucleotidesHER17_RS21295 and HER17_RS21300 are separated by 323 nucleotidesHER17_RS21300 and HER17_RS21305 overlap by 4 nucleotides HER17_RS21285: HER17_RS21285 - FecR domain-containing protein, at 4,765,119 to 4,766,108 _RS21285 HER17_RS21290: HER17_RS21290 - sigma-70 family RNA polymerase sigma factor, at 4,766,105 to 4,766,617 _RS21290 HER17_RS21295: HER17_RS21295 - TonB-dependent hemoglobin/transferrin/lactoferrin family receptor, at 4,766,799 to 4,769,348 _RS21295 HER17_RS21300: HER17_RS21300 - oligopeptidase A, at 4,769,672 to 4,771,714 _RS21300 HER17_RS21305: HER17_RS21305 - 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ, at 4,771,711 to 4,772,457 _RS21305
Group Condition HER17_RS21285 HER17_RS21290 HER17_RS21295 HER17_RS21300 HER17_RS21305
carbon source M9+glucose+arginine -0.0 -0.3 -0.0 -2.0 -0.1
carbon source M9+glucose+arginine +0.1 -0.1 -0.0 -2.1 -0.1
carbon source M9+glucose -0.2 -0.0 +0.1 -1.8 -0.0
carbon source M9+glucose +0.1 -0.1 +0.1 -1.9 -0.2
carbon source M9+glucose +0.1 +0.1 +0.1 -1.7 -0.1
carbon source M9+glucose+arginine -0.0 +0.2 +0.0 -1.7 +0.1
plant Tuber-Atlantic -0.1 -0.1 +0.0 -0.4 -0.3
carbon source M9+sucrose +0.2 -0.2 -0.1 -0.2 -0.3
carbon source M9+sucrose -0.1 -0.1 +0.0 -0.3 -0.1
carbon source M9+sucrose +0.1 +0.1 -0.1 -0.4 -0.2
control LB -0.1 -0.0 +0.0 +0.0 -0.4
carbon source M9+polygalacturonate +0.0 -0.1 +0.0 -0.2 -0.1
control LB -0.1 +0.0 -0.0 -0.2 +0.1
carbon source M9+glycerol -0.3 +0.0 +0.0 +0.1 -0.0
carbon source M9+glycerol -0.3 +0.1 +0.0 +0.1 -0.0
carbon source M9+starch +0.1 -0.1 -0.0 -0.0 -0.2
plant Tuber-Atlantic +0.0 +0.2 +0.0 -0.3 -0.1
carbon source M9+glycerol -0.3 -0.2 -0.0 +0.2 +0.2
carbon source M9+polygalacturonate +0.0 -0.0 -0.0 -0.1 +0.1
plant Tuber-Atlantic +0.1 +0.0 -0.1 -0.1 +0.0
control LB -0.1 -0.1 -0.0 +0.1 +0.0
control LB +0.1 -0.2 +0.0 -0.1 +0.1
carbon source M9+glycerol -0.1 -0.1 -0.0 +0.2 -0.1
carbon source M9+polygalacturonate +0.1 +0.1 -0.0 -0.1 -0.1
plant Tuber-Atlantic +0.3 +0.4 +0.0 -0.4 -0.3
carbon source M9+glycerol -0.1 -0.1 +0.0 +0.2 +0.1
carbon source M9+glycerol -0.1 +0.1 -0.1 +0.1 +0.1
control LB -0.0 +0.0 -0.0 -0.1 +0.3
carbon source M9+starch +0.2 +0.0 +0.1 -0.0 -0.0
carbon source M9+starch +0.0 +0.1 +0.0 +0.1 +0.0
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