Fitness for 5 genes in Pectobacterium carotovorum WPP14

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 31 experiments or choose conditions or try the comparative fitness browser

500 ntHER17_RS21055 and HER17_RS21060 are separated by 412 nucleotidesHER17_RS21060 and HER17_RS21065 are separated by 66 nucleotidesHER17_RS21065 and HER17_RS21070 are separated by 136 nucleotidesHER17_RS21070 and HER17_RS21075 are separated by 28 nucleotides HER17_RS21055: HER17_RS21055 - argininosuccinate synthase, at 4,709,157 to 4,710,503 _RS21055 HER17_RS21060: HER17_RS21060 - DJ-1/PfpI family protein, at 4,710,916 to 4,711,491 _RS21060 HER17_RS21065: HER17_RS21065 - XylR family transcriptional regulator, at 4,711,558 to 4,712,736 _RS21065 HER17_RS21070: HER17_RS21070 - sugar ABC transporter permease, at 4,712,873 to 4,714,003 _RS21070 HER17_RS21075: HER17_RS21075 - xylose ABC transporter ATP-binding protein, at 4,714,032 to 4,715,573 _RS21075
Group Condition HER17_RS21055 HER17_RS21060 HER17_RS21065 HER17_RS21070 HER17_RS21075
carbon source M9+polygalacturonate -6.4 +0.0 +0.0 +0.0 -0.0
carbon source M9+polygalacturonate -6.0 -0.1 +0.0 +0.0 -0.0
carbon source M9+glucose -5.8 -0.0 +0.1 -0.2 +0.1
carbon source M9+glucose -5.2 +0.0 -0.2 -0.2 -0.2
carbon source M9+glucose -5.9 +0.1 +0.0 +0.3 -0.1
carbon source M9+polygalacturonate -5.5 -0.0 +0.0 +0.2 +0.1
carbon source M9+sucrose -4.3 -0.1 +0.1 -0.1 +0.0
carbon source M9+sucrose -4.2 +0.0 +0.1 +0.0 -0.1
carbon source M9+sucrose -4.1 -0.0 +0.0 -0.0 +0.2
carbon source M9+glycerol -3.9 -0.1 -0.0 -0.1 +0.2
carbon source M9+glycerol -4.0 -0.1 +0.1 +0.1 +0.1
carbon source M9+glycerol -3.9 -0.1 -0.0 +0.1 +0.1
carbon source M9+glycerol -3.8 -0.1 -0.1 +0.3 -0.1
carbon source M9+glycerol -3.8 -0.1 +0.0 +0.1 -0.0
carbon source M9+starch -3.5 -0.0 +0.1 -0.1 -0.0
carbon source M9+glycerol -3.5 -0.1 -0.1 +0.2 +0.0
carbon source M9+starch -3.3 -0.1 +0.1 +0.1 +0.0
carbon source M9+starch -3.1 -0.1 +0.1 -0.1 +0.1
control LB -0.0 -0.1 +0.0 -0.2 +0.0
carbon source M9+glucose+arginine -0.1 -0.0 -0.1 -0.2 +0.1
plant Tuber-Atlantic -0.1 -0.0 +0.0 -0.2 +0.0
plant Tuber-Atlantic -0.2 -0.2 +0.1 +0.1 -0.1
control LB +0.1 -0.1 -0.0 -0.1 +0.0
control LB -0.1 +0.0 -0.0 +0.1 -0.0
carbon source M9+glucose+arginine -0.2 +0.1 +0.1 -0.0 +0.0
control LB -0.1 +0.0 -0.2 +0.1 +0.1
plant Tuber-Atlantic +0.2 +0.0 +0.0 +0.0 -0.0
carbon source M9+glucose+arginine +0.1 -0.0 -0.1 +0.2 +0.2
control LB -0.0 +0.1 +0.1 +0.1 +0.0
plant Tuber-Atlantic -0.2 +0.2 -0.2 +0.6 -0.0
remove
HER17_RS21055
plot		 remove
HER17_RS21060
plot		 remove
HER17_RS21065		 remove
HER17_RS21070
plot		 remove
HER17_RS21075
plot