Fitness for 5 genes in Pectobacterium carotovorum WPP14

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500 ntHER17_RS20770 and HER17_RS20775 are separated by 23 nucleotidesHER17_RS20775 and HER17_RS20780 overlap by 4 nucleotidesHER17_RS20780 and HER17_RS20785 are separated by 17 nucleotidesHER17_RS20785 and HER17_RS20790 are separated by 61 nucleotides HER17_RS20770: HER17_RS20770 - ADP-glyceromanno-heptose 6-epimerase, at 4,655,336 to 4,656,268 _RS20770 HER17_RS20775: HER17_RS20775 - ADP-heptose--LPS heptosyltransferase RfaF, at 4,656,292 to 4,657,395 _RS20775 HER17_RS20780: HER17_RS20780 - lipopolysaccharide heptosyltransferase RfaC, at 4,657,392 to 4,658,354 _RS20780 HER17_RS20785: HER17_RS20785 - putative lipopolysaccharide heptosyltransferase III, at 4,658,372 to 4,659,457 _RS20785 HER17_RS20790: HER17_RS20790 - O-antigen ligase family protein, at 4,659,519 to 4,660,766 _RS20790
Group Condition HER17_RS20770 HER17_RS20775 HER17_RS20780 HER17_RS20785 HER17_RS20790
control LB -1.6 -1.0 -1.3 -3.3 -4.5
control LB -0.8 -0.5 -0.7 -3.5 -4.6
control LB -1.0 -0.7 -0.6 -3.4 -4.2
control LB -0.8 -1.0 -1.0 -3.2 -4.0
control LB -1.4 -0.5 -0.8 -2.9 -3.8
control LB -0.8 -0.2 -0.8 -2.7 -4.0
plant Tuber-Atlantic -1.8 -1.9 -1.9 -0.6 +0.5
plant Tuber-Atlantic -1.3 -1.0 -2.0 -0.8 +0.2
plant Tuber-Atlantic -1.2 -1.0 -1.5 -0.9 +0.8
carbon source M9+polygalacturonate -1.2 -0.4 -0.9 -1.1 +0.1
plant Tuber-Atlantic -1.5 -0.8 -1.5 -0.0 +0.9
carbon source M9+polygalacturonate -0.7 -0.8 -0.3 -1.1 -0.0
carbon source M9+glycerol +0.5 -0.2 +0.5 -0.6 -3.0
carbon source M9+polygalacturonate -1.2 -0.4 -0.6 -0.8 +0.2
carbon source M9+starch -0.6 -0.5 -0.6 -0.7 +0.2
carbon source M9+glycerol +0.4 +0.2 +0.7 -1.0 -2.3
carbon source M9+glycerol +0.8 +0.2 +0.5 -0.4 -3.0
carbon source M9+glycerol +0.3 +0.2 +0.3 -0.3 -2.3
carbon source M9+starch -0.4 -0.5 -0.2 -0.7 +0.2
carbon source M9+sucrose -0.4 +0.2 -0.3 -0.8 +0.1
carbon source M9+glycerol +0.8 +0.5 +0.6 -0.5 -2.5
carbon source M9+glycerol +0.7 +0.5 +0.7 -0.6 -2.4
carbon source M9+sucrose -0.8 +0.2 +0.0 -0.6 +0.2
carbon source M9+sucrose -0.8 -0.2 +0.4 -0.5 +0.2
carbon source M9+glucose+arginine +1.1 +0.8 +1.3 +0.3 +0.3
carbon source M9+glucose +1.6 +1.6 +1.3 +0.4 +0.3
carbon source M9+glucose +1.3 +1.2 +1.6 +0.6 +0.4
carbon source M9+glucose+arginine +1.6 +1.1 +1.7 +0.6 +0.2
carbon source M9+glucose+arginine +1.4 +1.4 +1.6 +1.0 +0.4
carbon source M9+glucose +1.7 +1.6 +1.8 +0.7 +0.4
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HER17_RS20770
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HER17_RS20775
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HER17_RS20790
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