Fitness for 5 genes in Pectobacterium carotovorum WPP14

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 31 experiments or choose conditions or try the comparative fitness browser

500 ntHER17_RS20395 and HER17_RS20400 are separated by 1 nucleotidesHER17_RS20400 and HER17_RS20405 overlap by 4 nucleotidesHER17_RS20405 and HER17_RS20410 are separated by 295 nucleotidesHER17_RS20410 and HER17_RS20415 are separated by 230 nucleotides HER17_RS20395: HER17_RS20395 - sulfur carrier protein ThiS, at 4,570,867 to 4,571,067 _RS20395 HER17_RS20400: HER17_RS20400 - thiazole synthase, at 4,571,069 to 4,571,854 _RS20400 HER17_RS20405: HER17_RS20405 - 2-iminoacetate synthase ThiH, at 4,571,851 to 4,572,972 _RS20405 HER17_RS20410: HER17_RS20410 - PLP-dependent aminotransferase family protein, at 4,573,268 to 4,574,704 _RS20410 HER17_RS20415: HER17_RS20415 - DUF1127 domain-containing protein, at 4,574,935 to 4,575,069 _RS20415
Group Condition HER17_RS20395 HER17_RS20400 HER17_RS20405 HER17_RS20410 HER17_RS20415
carbon source M9+polygalacturonate -4.9 -2.0 -2.1 +0.1 -0.1
carbon source M9+polygalacturonate -2.3 -2.0 -1.9 +0.0 -0.1
carbon source M9+glucose -2.3 -1.7 -1.2 -0.1 +0.2
carbon source M9+polygalacturonate -1.7 -1.6 -1.7 -0.1 +0.4
carbon source M9+glucose -2.2 -0.8 -1.4 +0.0 +0.3
carbon source M9+sucrose -2.1 -1.0 -0.7 -0.1 +0.0
carbon source M9+glucose -1.6 -1.1 -1.2 +0.0 -0.0
carbon source M9+glucose+arginine -1.4 -0.6 -1.1 -0.1 -0.4
carbon source M9+glucose+arginine -0.5 -1.4 -1.2 -0.1 +0.1
carbon source M9+glucose+arginine -0.4 -1.0 -1.3 +0.1 -0.0
carbon source M9+sucrose -1.6 -0.5 -0.5 +0.1 +0.2
plant Tuber-Atlantic -1.6 +0.3 +0.1 +0.2 -0.4
carbon source M9+starch -0.5 -0.3 +0.0 -0.0 +0.0
carbon source M9+sucrose +0.3 -0.1 -0.6 +0.0 -0.4
plant Tuber-Atlantic -1.4 +0.5 -0.1 -0.3 +0.7
carbon source M9+glycerol -0.6 -0.2 +0.0 +0.0 +0.1
carbon source M9+glycerol -0.5 +0.1 +0.0 -0.1 -0.0
control LB -0.6 +0.1 +0.1 -0.1 +0.0
control LB -0.4 +0.2 +0.0 -0.0 -0.1
carbon source M9+glycerol -0.3 +0.2 +0.1 -0.0 -0.3
carbon source M9+glycerol -0.2 +0.0 +0.1 -0.0 +0.0
carbon source M9+starch -0.1 -0.0 +0.0 +0.1 -0.0
plant Tuber-Atlantic -0.8 +0.6 -0.1 +0.0 +0.3
control LB -0.1 +0.2 -0.0 +0.0 -0.1
carbon source M9+starch +0.2 -0.0 -0.1 +0.1 -0.1
plant Tuber-Atlantic -0.2 +0.2 +0.0 -0.1 +0.2
carbon source M9+glycerol -0.3 +0.2 +0.0 +0.0 +0.2
carbon source M9+glycerol +0.0 +0.3 -0.0 -0.0 +0.3
control LB +0.2 +0.1 +0.1 +0.0 +0.1
control LB +0.2 +0.3 -0.0 -0.0 +0.4
remove
HER17_RS20395
plot
remove
HER17_RS20400
plot
remove
HER17_RS20405
remove
HER17_RS20410
plot
remove
HER17_RS20415
plot