Fitness for 5 genes in Pectobacterium carotovorum WPP14

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500 ntHER17_RS20170 and HER17_RS20175 are separated by 316 nucleotidesHER17_RS20175 and HER17_RS20180 are separated by 177 nucleotidesHER17_RS20180 and HER17_RS20185 are separated by 379 nucleotidesHER17_RS20185 and HER17_RS20190 are separated by 78 nucleotides HER17_RS20170: HER17_RS20170 - rod shape-determining protein MreB, at 4,525,730 to 4,526,773 _RS20170 HER17_RS20175: HER17_RS20175 - RNase E specificity factor CsrD, at 4,527,090 to 4,529,027 _RS20175 HER17_RS20180: HER17_RS20180 - oxidoreductase, at 4,529,205 to 4,530,182 _RS20180 HER17_RS20185: HER17_RS20185 - protein-methionine-sulfoxide reductase catalytic subunit MsrP, at 4,530,562 to 4,531,563 _RS20185 HER17_RS20190: HER17_RS20190 - protein-methionine-sulfoxide reductase heme-binding subunit MsrQ, at 4,531,642 to 4,532,241 _RS20190
Group Condition HER17_RS20170 HER17_RS20175 HER17_RS20180 HER17_RS20185 HER17_RS20190
plant Tuber-Atlantic N.D. -0.3 -0.2 -0.4 +0.5
carbon source M9+glucose+arginine N.D. -0.3 +0.0 +0.1 -0.2
plant Tuber-Atlantic N.D. +0.1 -0.0 -0.1 -0.2
carbon source M9+polygalacturonate N.D. -0.2 +0.1 +0.0 -0.1
carbon source M9+glycerol N.D. -0.0 +0.0 -0.1 +0.0
carbon source M9+starch N.D. -0.1 +0.2 -0.0 -0.1
carbon source M9+starch N.D. -0.2 +0.0 -0.1 +0.1
carbon source M9+glucose N.D. +0.0 +0.1 -0.1 -0.1
carbon source M9+glucose+arginine N.D. +0.0 -0.1 +0.1 -0.1
carbon source M9+polygalacturonate N.D. -0.1 +0.1 -0.0 +0.1
carbon source M9+starch N.D. -0.2 +0.0 +0.1 +0.1
carbon source M9+polygalacturonate N.D. -0.2 +0.1 +0.1 +0.1
carbon source M9+sucrose N.D. -0.1 +0.1 -0.0 +0.1
plant Tuber-Atlantic N.D. +0.1 -0.1 -0.1 +0.3
carbon source M9+glucose N.D. -0.2 +0.1 +0.1 +0.1
control LB N.D. +0.0 +0.1 -0.0 +0.1
carbon source M9+glycerol N.D. +0.4 +0.0 -0.2 +0.1
carbon source M9+sucrose N.D. +0.1 +0.1 +0.0 +0.1
control LB N.D. +0.1 +0.2 -0.0 +0.1
carbon source M9+glucose+arginine N.D. +0.1 -0.0 +0.1 +0.1
control LB N.D. +0.1 -0.0 +0.1 +0.1
carbon source M9+glycerol N.D. +0.3 -0.2 -0.0 +0.2
control LB N.D. +0.0 +0.2 +0.0 +0.1
carbon source M9+glycerol N.D. +0.3 -0.1 +0.1 +0.1
control LB N.D. +0.0 +0.1 +0.2 +0.2
carbon source M9+glycerol N.D. +0.4 +0.0 -0.0 +0.1
control LB N.D. +0.0 +0.1 +0.2 +0.2
plant Tuber-Atlantic N.D. -0.0 +0.7 -0.0 -0.1
carbon source M9+glycerol N.D. +0.4 +0.1 +0.0 +0.2
carbon source M9+glucose N.D. -0.0 +0.1 +0.5 +0.3
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