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Protein
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Fitness for 5 genes in
Pectobacterium carotovorum WPP14
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HER17_RS20075 and HER17_RS20080 are separated by 31 nucleotides
HER17_RS20080 and HER17_RS20085 are separated by 172 nucleotides
HER17_RS20085 and HER17_RS20090 are separated by 65 nucleotides
HER17_RS20090 and HER17_RS20095 are separated by 295 nucleotides
HER17_RS20075: HER17_RS20075 - RNase adapter RapZ, at 4,504,508 to 4,505,365
_RS20075
HER17_RS20080: HER17_RS20080 - PTS phosphocarrier protein NPr, at 4,505,397 to 4,505,669
_RS20080
HER17_RS20085: HER17_RS20085 - nucleoside diphosphate kinase regulator, at 4,505,842 to 4,506,252
_RS20085
HER17_RS20090: HER17_RS20090 - metalloprotease PmbA, at 4,506,318 to 4,507,658
_RS20090
HER17_RS20095: HER17_RS20095 - ribosome-associated protein, at 4,507,954 to 4,508,505
_RS20095
Group
Condition
HER17
_RS20075
HER17
_RS20080
HER17
_RS20085
HER17
_RS20090
HER17
_RS20095
carbon source
M9+glucose+arginine
-1.6
-0.8
-0.0
-0.1
N.D.
carbon source
M9+glucose+arginine
-2.0
-0.7
+0.2
-0.0
N.D.
carbon source
M9+glucose
-1.9
-0.4
-0.0
+0.0
N.D.
carbon source
M9+glucose
-1.7
-0.2
-0.0
-0.2
N.D.
carbon source
M9+glucose+arginine
-1.5
-0.3
+0.1
-0.0
N.D.
carbon source
M9+glycerol
-1.0
-0.6
-0.1
+0.1
N.D.
carbon source
M9+glucose
-2.3
+0.9
-0.0
-0.1
N.D.
carbon source
M9+sucrose
-0.9
-0.6
+0.0
+0.1
N.D.
carbon source
M9+glycerol
-1.2
-0.0
-0.1
+0.1
N.D.
plant
Tuber-Atlantic
-0.3
-0.5
-0.3
-0.1
N.D.
carbon source
M9+polygalacturonate
-1.1
-0.0
+0.1
+0.1
N.D.
carbon source
M9+polygalacturonate
-1.1
-0.1
+0.1
+0.2
N.D.
carbon source
M9+glycerol
-0.9
-0.0
+0.2
-0.2
N.D.
carbon source
M9+glycerol
-1.0
+0.1
+0.1
-0.1
N.D.
carbon source
M9+polygalacturonate
-0.9
+0.0
+0.1
-0.1
N.D.
plant
Tuber-Atlantic
+0.2
-0.6
-0.5
+0.1
N.D.
plant
Tuber-Atlantic
+0.1
-1.0
+0.1
+0.0
N.D.
carbon source
M9+starch
-0.0
-0.4
-0.1
-0.2
N.D.
carbon source
M9+sucrose
-0.8
+0.4
-0.1
-0.0
N.D.
carbon source
M9+glycerol
-0.9
+0.5
+0.1
-0.3
N.D.
carbon source
M9+glycerol
-0.9
+0.6
-0.0
+0.1
N.D.
carbon source
M9+sucrose
-0.6
+0.4
-0.1
+0.0
N.D.
carbon source
M9+starch
-0.1
+0.3
-0.0
-0.0
N.D.
control
LB
+0.3
+0.1
+0.2
-0.1
N.D.
control
LB
-0.0
+0.3
+0.2
-0.0
N.D.
control
LB
+0.4
+0.2
+0.1
-0.0
N.D.
control
LB
+0.4
+0.1
+0.0
+0.1
N.D.
control
LB
+0.4
+0.5
+0.2
+0.0
N.D.
control
LB
+0.3
+0.8
+0.1
+0.1
N.D.
plant
Tuber-Atlantic
+1.0
+0.6
+0.1
-0.1
N.D.
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