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Protein
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Fitness for 5 genes in
Pectobacterium carotovorum WPP14
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HER17_RS19985 and HER17_RS19990 are separated by 137 nucleotides
HER17_RS19990 and HER17_RS19995 are separated by 97 nucleotides
HER17_RS19995 and HER17_RS20000 are separated by 84 nucleotides
HER17_RS20000 and HER17_RS20005 are separated by 134 nucleotides
HER17_RS19985: HER17_RS19985 - serine endoprotease DegQ, at 4,489,464 to 4,490,834
_RS19985
HER17_RS19990: HER17_RS19990 - outer membrane-stress sensor serine endopeptidase DegS, at 4,490,972 to 4,492,069
_RS19990
HER17_RS19995: HER17_RS19995 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase, at 4,492,167 to 4,493,429
_RS19995
HER17_RS20000: HER17_RS20000 - BolA family iron metabolism protein IbaG, at 4,493,514 to 4,493,768
_RS20000
HER17_RS20005: HER17_RS20005 - lipid asymmetry maintenance protein MlaB, at 4,493,903 to 4,494,193
_RS20005
Group
Condition
HER17
_RS19985
HER17
_RS19990
HER17
_RS19995
HER17
_RS20000
HER17
_RS20005
carbon source
M9+glycerol
-0.2
-4.6
N.D.
-0.4
+0.3
carbon source
M9+glycerol
-0.2
-3.9
N.D.
-0.4
-0.2
carbon source
M9+glycerol
-0.2
-4.0
N.D.
-0.8
+0.4
carbon source
M9+glycerol
-0.4
-3.9
N.D.
-0.1
-0.2
control
LB
-0.4
-3.9
N.D.
-0.6
+0.3
control
LB
-0.4
-3.8
N.D.
-0.4
+0.1
control
LB
-0.2
-4.0
N.D.
-0.4
+0.2
carbon source
M9+glycerol
-0.2
-3.7
N.D.
-0.3
-0.1
control
LB
-0.3
-4.0
N.D.
+0.1
-0.0
control
LB
-0.4
-3.9
N.D.
-0.2
+0.4
control
LB
-0.1
-3.8
N.D.
-0.5
+0.5
carbon source
M9+glycerol
-0.3
-3.5
N.D.
-0.1
+0.3
carbon source
M9+polygalacturonate
-0.2
-0.7
N.D.
-0.9
-0.3
carbon source
M9+sucrose
-0.2
-0.8
N.D.
-0.8
+0.2
carbon source
M9+sucrose
+0.1
-0.9
N.D.
-0.5
-0.2
carbon source
M9+polygalacturonate
+0.0
-0.6
N.D.
-0.8
-0.1
carbon source
M9+glucose+arginine
-0.6
-0.8
N.D.
+0.3
-0.2
carbon source
M9+polygalacturonate
+0.0
-0.8
N.D.
-0.5
+0.1
plant
Tuber-Atlantic
-0.4
+0.9
N.D.
-0.7
-1.0
carbon source
M9+starch
+0.1
-1.0
N.D.
-0.2
-0.0
carbon source
M9+starch
-0.3
-0.8
N.D.
-0.1
+0.2
plant
Tuber-Atlantic
-0.3
+0.1
N.D.
-0.6
-0.3
plant
Tuber-Atlantic
-1.0
+0.4
N.D.
-0.7
+0.3
carbon source
M9+glucose+arginine
-0.5
-0.8
N.D.
+0.9
-0.3
carbon source
M9+glucose+arginine
-0.3
-0.8
N.D.
+0.8
+0.0
carbon source
M9+starch
-0.0
-0.6
N.D.
+0.1
+0.3
carbon source
M9+glucose
-0.3
-0.5
N.D.
+1.1
-0.3
carbon source
M9+glucose
-0.5
-0.6
N.D.
+1.4
-0.2
carbon source
M9+glucose
-0.2
-0.9
N.D.
+1.3
+0.0
plant
Tuber-Atlantic
+0.4
+0.7
N.D.
-0.9
+0.0
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