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Protein
Homologs
Fitness for 5 genes in
Pectobacterium carotovorum WPP14
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HER17_RS19300 and HER17_RS19305 are separated by 5 nucleotides
HER17_RS19305 and HER17_RS19310 overlap by 4 nucleotides
HER17_RS19310 and HER17_RS19315 are separated by 79 nucleotides
HER17_RS19315 and HER17_RS19320 are separated by 15 nucleotides
HER17_RS19300: HER17_RS19300 - HNH endonuclease, at 4,339,550 to 4,340,341
_RS19300
HER17_RS19305: HER17_RS19305 - type II toxin-antitoxin system RelE/ParE family toxin, at 4,340,347 to 4,340,652
_RS19305
HER17_RS19310: HER17_RS19310 - DNA-damage-inducible protein J, at 4,340,649 to 4,340,933
_RS19310
HER17_RS19315: HER17_RS19315 - hypothetical protein, at 4,341,013 to 4,342,356
_RS19315
HER17_RS19320: HER17_RS19320 - RtcB family protein, at 4,342,372 to 4,343,598
_RS19320
Group
Condition
HER17
_RS19300
HER17
_RS19305
HER17
_RS19310
HER17
_RS19315
HER17
_RS19320
carbon source
M9+glucose
-0.2
-0.1
N.D.
-0.3
-0.1
carbon source
M9+polygalacturonate
-0.2
-0.0
N.D.
-0.1
-0.1
carbon source
M9+polygalacturonate
-0.0
-0.0
N.D.
-0.1
-0.2
carbon source
M9+glucose
+0.1
-0.0
N.D.
-0.3
-0.1
carbon source
M9+sucrose
-0.1
-0.1
N.D.
-0.0
-0.1
control
LB
-0.1
-0.0
N.D.
-0.1
-0.0
carbon source
M9+glucose
+0.1
-0.1
N.D.
-0.3
+0.0
control
LB
+0.1
-0.2
N.D.
-0.1
+0.0
carbon source
M9+glycerol
+0.1
-0.1
N.D.
-0.2
+0.0
carbon source
M9+sucrose
+0.0
-0.0
N.D.
-0.1
-0.1
carbon source
M9+polygalacturonate
+0.1
-0.1
N.D.
-0.1
-0.0
control
LB
+0.2
-0.1
N.D.
-0.2
-0.1
carbon source
M9+starch
-0.1
-0.1
N.D.
+0.0
+0.0
carbon source
M9+glucose+arginine
+0.1
+0.0
N.D.
-0.1
-0.2
carbon source
M9+glucose+arginine
+0.2
+0.0
N.D.
-0.3
-0.1
carbon source
M9+glycerol
+0.1
-0.0
N.D.
-0.1
-0.1
carbon source
M9+glycerol
-0.2
+0.0
N.D.
-0.1
+0.1
carbon source
M9+glycerol
+0.1
+0.0
N.D.
-0.2
+0.0
carbon source
M9+glucose+arginine
-0.2
-0.0
N.D.
-0.0
+0.2
carbon source
M9+starch
+0.1
-0.0
N.D.
-0.1
-0.1
carbon source
M9+glycerol
+0.1
-0.1
N.D.
-0.2
+0.0
plant
Tuber-Atlantic
+0.1
-0.0
N.D.
-0.1
+0.1
control
LB
+0.1
-0.1
N.D.
+0.0
+0.0
control
LB
-0.1
+0.0
N.D.
+0.1
+0.1
carbon source
M9+sucrose
+0.1
-0.0
N.D.
+0.1
-0.0
control
LB
+0.1
-0.1
N.D.
+0.0
+0.2
carbon source
M9+starch
+0.3
-0.0
N.D.
+0.2
+0.0
plant
Tuber-Atlantic
+0.3
+0.2
N.D.
+0.1
-0.1
plant
Tuber-Atlantic
+0.6
-0.1
N.D.
-0.0
+0.1
plant
Tuber-Atlantic
-0.1
+0.4
N.D.
+0.3
-0.1
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