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Protein
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Fitness for 5 genes in
Pectobacterium carotovorum WPP14
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HER17_RS18395 and HER17_RS18400 are separated by 109 nucleotides
HER17_RS18400 and HER17_RS18405 are separated by 227 nucleotides
HER17_RS18405 and HER17_RS18410 are separated by 154 nucleotides
HER17_RS18410 and HER17_RS18415 are separated by 154 nucleotides
HER17_RS18395: HER17_RS18395 - transcriptional regulator ArgR, at 4,143,610 to 4,144,080
_RS18395
HER17_RS18400: HER17_RS18400 - tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD, at 4,144,190 to 4,145,203
_RS18400
HER17_RS18405: HER17_RS18405 - 30S ribosomal protein S21, at 4,145,431 to 4,145,646
_RS18405
HER17_RS18410: HER17_RS18410 - DNA primase, at 4,145,801 to 4,147,555
_RS18410
HER17_RS18415: HER17_RS18415 - RNA polymerase sigma factor RpoD, at 4,147,710 to 4,149,545
_RS18415
Group
Condition
HER17
_RS18395
HER17
_RS18400
HER17
_RS18405
HER17
_RS18410
HER17
_RS18415
carbon source
M9+glucose
-3.1
N.D.
N.D.
N.D.
N.D.
carbon source
M9+glucose+arginine
-2.6
N.D.
N.D.
N.D.
N.D.
carbon source
M9+glucose+arginine
-2.4
N.D.
N.D.
N.D.
N.D.
plant
Tuber-Atlantic
-2.4
N.D.
N.D.
N.D.
N.D.
carbon source
M9+glucose
-2.3
N.D.
N.D.
N.D.
N.D.
plant
Tuber-Atlantic
-2.3
N.D.
N.D.
N.D.
N.D.
carbon source
M9+glucose+arginine
-2.3
N.D.
N.D.
N.D.
N.D.
carbon source
M9+polygalacturonate
-1.9
N.D.
N.D.
N.D.
N.D.
plant
Tuber-Atlantic
-1.7
N.D.
N.D.
N.D.
N.D.
carbon source
M9+sucrose
-1.7
N.D.
N.D.
N.D.
N.D.
carbon source
M9+starch
-1.5
N.D.
N.D.
N.D.
N.D.
carbon source
M9+polygalacturonate
-1.5
N.D.
N.D.
N.D.
N.D.
plant
Tuber-Atlantic
-1.4
N.D.
N.D.
N.D.
N.D.
carbon source
M9+sucrose
-1.3
N.D.
N.D.
N.D.
N.D.
carbon source
M9+starch
-1.2
N.D.
N.D.
N.D.
N.D.
carbon source
M9+glucose
-1.2
N.D.
N.D.
N.D.
N.D.
carbon source
M9+polygalacturonate
-1.2
N.D.
N.D.
N.D.
N.D.
carbon source
M9+sucrose
-0.9
N.D.
N.D.
N.D.
N.D.
carbon source
M9+starch
-0.9
N.D.
N.D.
N.D.
N.D.
carbon source
M9+glycerol
-0.9
N.D.
N.D.
N.D.
N.D.
carbon source
M9+glycerol
-0.8
N.D.
N.D.
N.D.
N.D.
carbon source
M9+glycerol
-0.5
N.D.
N.D.
N.D.
N.D.
control
LB
-0.4
N.D.
N.D.
N.D.
N.D.
carbon source
M9+glycerol
-0.4
N.D.
N.D.
N.D.
N.D.
carbon source
M9+glycerol
-0.4
N.D.
N.D.
N.D.
N.D.
carbon source
M9+glycerol
-0.4
N.D.
N.D.
N.D.
N.D.
control
LB
-0.3
N.D.
N.D.
N.D.
N.D.
control
LB
-0.2
N.D.
N.D.
N.D.
N.D.
control
LB
-0.2
N.D.
N.D.
N.D.
N.D.
control
LB
+0.4
N.D.
N.D.
N.D.
N.D.
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