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Protein
Homologs
Fitness for 5 genes in
Pectobacterium carotovorum WPP14
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HER17_RS18270 and HER17_RS18275 are separated by 140 nucleotides
HER17_RS18275 and HER17_RS18280 are separated by 77 nucleotides
HER17_RS18280 and HER17_RS18285 are separated by 64 nucleotides
HER17_RS18285 and HER17_RS18290 are separated by 52 nucleotides
HER17_RS18270: HER17_RS18270 - hypothetical protein, at 4,114,759 to 4,115,031
_RS18270
HER17_RS18275: HER17_RS18275 - type I polyketide synthase, at 4,115,172 to 4,120,673
_RS18275
HER17_RS18280: HER17_RS18280 - non-ribosomal peptide synthetase, at 4,120,751 to 4,124,824
_RS18280
HER17_RS18285: HER17_RS18285 - hypothetical protein, at 4,124,889 to 4,125,515
_RS18285
HER17_RS18290: HER17_RS18290 - NADP-dependent oxidoreductase, at 4,125,568 to 4,126,584
_RS18290
Group
Condition
HER17
_RS18270
HER17
_RS18275
HER17
_RS18280
HER17
_RS18285
HER17
_RS18290
carbon source
M9+sucrose
-0.5
-0.0
+0.0
+0.0
+0.0
carbon source
M9+polygalacturonate
-0.2
-0.1
+0.0
-0.0
-0.1
carbon source
M9+glucose+arginine
-0.3
-0.0
+0.1
-0.1
-0.0
carbon source
M9+glycerol
-0.3
-0.0
+0.0
-0.0
+0.0
plant
Tuber-Atlantic
+0.2
-0.1
+0.0
-0.2
-0.3
carbon source
M9+glucose
-0.3
-0.0
+0.1
+0.2
-0.1
carbon source
M9+glucose+arginine
-0.1
-0.0
+0.1
-0.1
-0.1
carbon source
M9+glycerol
-0.2
+0.0
-0.0
+0.2
-0.1
carbon source
M9+glucose+arginine
+0.0
-0.1
+0.0
-0.2
+0.1
carbon source
M9+starch
-0.1
-0.0
+0.0
+0.0
-0.0
carbon source
M9+glycerol
-0.0
+0.0
-0.0
+0.1
-0.1
control
LB
+0.1
+0.0
-0.0
-0.0
-0.0
control
LB
+0.2
-0.0
-0.1
+0.0
-0.1
carbon source
M9+glycerol
-0.0
-0.0
+0.0
+0.0
+0.1
carbon source
M9+glycerol
+0.1
-0.0
-0.0
-0.0
+0.0
carbon source
M9+polygalacturonate
+0.2
-0.0
+0.0
-0.1
-0.1
carbon source
M9+sucrose
+0.3
-0.1
+0.0
-0.2
-0.0
plant
Tuber-Atlantic
+0.1
-0.0
-0.0
-0.0
+0.0
control
LB
+0.2
-0.0
+0.0
+0.0
-0.1
carbon source
M9+glycerol
+0.1
+0.0
-0.0
+0.1
-0.0
control
LB
+0.2
+0.0
+0.0
-0.0
-0.0
control
LB
+0.1
+0.0
-0.1
+0.1
+0.0
carbon source
M9+polygalacturonate
-0.0
-0.0
+0.0
+0.1
+0.1
carbon source
M9+glucose
+0.4
-0.0
-0.1
-0.1
+0.0
carbon source
M9+glucose
+0.4
-0.0
-0.1
+0.0
+0.0
carbon source
M9+starch
+0.2
-0.0
-0.0
+0.1
+0.2
carbon source
M9+sucrose
+0.3
-0.0
+0.1
-0.0
+0.1
plant
Tuber-Atlantic
+0.1
+0.0
+0.0
+0.2
+0.3
control
LB
+0.7
-0.1
+0.0
-0.3
+0.1
plant
Tuber-Atlantic
+0.9
+0.0
+0.1
+0.0
-0.2
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