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Fitness for 5 genes in
Pectobacterium carotovorum WPP14
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HER17_RS18195 and HER17_RS18200 are separated by 122 nucleotides
HER17_RS18200 and HER17_RS18205 overlap by 1 nucleotides
HER17_RS18205 and HER17_RS18210 are separated by 74 nucleotides
HER17_RS18210 and HER17_RS18215 are separated by 25 nucleotides
HER17_RS18195: HER17_RS18195 - 30S ribosomal protein S15, at 4,098,524 to 4,098,793
_RS18195
HER17_RS18200: HER17_RS18200 - tRNA pseudouridine(55) synthase TruB, at 4,098,916 to 4,099,860
_RS18200
HER17_RS18205: HER17_RS18205 - 30S ribosome-binding factor RbfA, at 4,099,860 to 4,100,258
_RS18205
HER17_RS18210: HER17_RS18210 - translation initiation factor IF-2, at 4,100,333 to 4,103,032
_RS18210
HER17_RS18215: HER17_RS18215 - transcription termination factor NusA, at 4,103,058 to 4,104,587
_RS18215
Group
Condition
HER17
_RS18195
HER17
_RS18200
HER17
_RS18205
HER17
_RS18210
HER17
_RS18215
plant
Tuber-Atlantic
N.D.
-0.4
N.D.
N.D.
N.D.
carbon source
M9+glucose
N.D.
-0.4
N.D.
N.D.
N.D.
carbon source
M9+glucose
N.D.
-0.3
N.D.
N.D.
N.D.
control
LB
N.D.
-0.3
N.D.
N.D.
N.D.
carbon source
M9+glucose
N.D.
-0.3
N.D.
N.D.
N.D.
control
LB
N.D.
-0.3
N.D.
N.D.
N.D.
carbon source
M9+glycerol
N.D.
-0.3
N.D.
N.D.
N.D.
control
LB
N.D.
-0.3
N.D.
N.D.
N.D.
carbon source
M9+sucrose
N.D.
-0.3
N.D.
N.D.
N.D.
carbon source
M9+glycerol
N.D.
-0.3
N.D.
N.D.
N.D.
carbon source
M9+polygalacturonate
N.D.
-0.2
N.D.
N.D.
N.D.
carbon source
M9+glycerol
N.D.
-0.2
N.D.
N.D.
N.D.
control
LB
N.D.
-0.2
N.D.
N.D.
N.D.
carbon source
M9+starch
N.D.
-0.2
N.D.
N.D.
N.D.
carbon source
M9+sucrose
N.D.
-0.2
N.D.
N.D.
N.D.
carbon source
M9+glucose+arginine
N.D.
-0.2
N.D.
N.D.
N.D.
carbon source
M9+glycerol
N.D.
-0.2
N.D.
N.D.
N.D.
carbon source
M9+glycerol
N.D.
-0.2
N.D.
N.D.
N.D.
carbon source
M9+polygalacturonate
N.D.
-0.2
N.D.
N.D.
N.D.
carbon source
M9+polygalacturonate
N.D.
-0.2
N.D.
N.D.
N.D.
carbon source
M9+starch
N.D.
-0.2
N.D.
N.D.
N.D.
control
LB
N.D.
-0.1
N.D.
N.D.
N.D.
control
LB
N.D.
-0.1
N.D.
N.D.
N.D.
plant
Tuber-Atlantic
N.D.
-0.1
N.D.
N.D.
N.D.
carbon source
M9+glycerol
N.D.
-0.0
N.D.
N.D.
N.D.
carbon source
M9+starch
N.D.
-0.0
N.D.
N.D.
N.D.
carbon source
M9+sucrose
N.D.
+0.0
N.D.
N.D.
N.D.
carbon source
M9+glucose+arginine
N.D.
+0.0
N.D.
N.D.
N.D.
plant
Tuber-Atlantic
N.D.
+0.1
N.D.
N.D.
N.D.
plant
Tuber-Atlantic
N.D.
+0.3
N.D.
N.D.
N.D.
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