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Protein
Homologs
Fitness for 5 genes in
Pectobacterium carotovorum WPP14
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HER17_RS18160 and HER17_RS18165 are separated by 11 nucleotides
HER17_RS18165 and HER17_RS18170 are separated by 164 nucleotides
HER17_RS18170 and HER17_RS18175 are separated by 87 nucleotides
HER17_RS18175 and HER17_RS18185 are separated by 174 nucleotides
HER17_RS18160: HER17_RS18160 - U32 family peptidase, at 4,089,902 to 4,090,897
_RS18160
HER17_RS18165: HER17_RS18165 - U32 family peptidase, at 4,090,909 to 4,091,787
_RS18165
HER17_RS18170: HER17_RS18170 - LLM class flavin-dependent oxidoreductase, at 4,091,952 to 4,092,959
_RS18170
HER17_RS18175: HER17_RS18175 - DEAD/DEAH family ATP-dependent RNA helicase, at 4,093,047 to 4,094,954
_RS18175
HER17_RS18185: HER17_RS18185 - lipoprotein NlpI, at 4,095,129 to 4,096,013
_RS18185
Group
Condition
HER17
_RS18160
HER17
_RS18165
HER17
_RS18170
HER17
_RS18175
HER17
_RS18185
carbon source
M9+glucose+arginine
+0.1
-0.1
-0.7
-0.6
-3.1
carbon source
M9+glucose+arginine
-0.1
-0.3
-0.4
-0.6
-3.0
carbon source
M9+glucose+arginine
+0.0
-0.2
-0.1
-0.2
-3.7
carbon source
M9+glucose
+0.1
-0.0
-0.5
-0.3
-2.6
carbon source
M9+glycerol
+0.0
+0.1
+0.1
-1.2
-2.0
carbon source
M9+glucose
-0.0
+0.1
-0.6
+0.4
-2.9
carbon source
M9+glucose
-0.0
+0.1
-0.3
+0.1
-2.9
carbon source
M9+glycerol
-0.1
-0.1
+0.3
-0.9
-1.7
carbon source
M9+glycerol
+0.0
-0.2
+0.2
-0.3
-2.2
carbon source
M9+glycerol
+0.1
-0.0
-0.2
-0.3
-1.8
carbon source
M9+sucrose
-0.1
-0.1
-0.1
-0.6
-1.2
control
LB
+0.1
+0.1
+0.0
-1.2
-1.0
plant
Tuber-Atlantic
-0.6
-0.8
+0.0
+0.1
-0.5
carbon source
M9+starch
+0.1
-0.1
+0.1
-0.9
-0.9
carbon source
M9+glycerol
+0.0
+0.0
+0.1
-0.7
-1.2
plant
Tuber-Atlantic
-0.2
-0.4
+0.0
-0.0
-1.1
plant
Tuber-Atlantic
+0.0
-0.2
-0.0
-0.6
-0.8
carbon source
M9+starch
-0.1
+0.1
-0.1
-0.7
-0.8
control
LB
+0.0
+0.1
+0.0
-0.8
-0.9
carbon source
M9+glycerol
+0.0
-0.1
+0.1
-0.1
-1.4
carbon source
M9+sucrose
-0.0
-0.2
-0.2
+0.2
-1.2
carbon source
M9+polygalacturonate
-0.0
+0.0
-0.1
-0.2
-1.1
control
LB
-0.0
+0.1
-0.2
-0.4
-1.0
control
LB
-0.1
-0.0
-0.2
+0.1
-1.0
carbon source
M9+polygalacturonate
-0.0
-0.1
+0.1
-0.2
-1.1
carbon source
M9+sucrose
-0.0
+0.1
-0.1
+0.3
-1.4
plant
Tuber-Atlantic
-0.5
-0.3
+0.2
-1.0
+0.5
carbon source
M9+starch
+0.1
-0.1
-0.1
-0.5
-0.3
control
LB
+0.1
-0.2
+0.2
+0.2
-0.8
control
LB
+0.1
+0.0
-0.0
+0.4
-0.9
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