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Protein
Homologs
Fitness for 5 genes in
Pectobacterium carotovorum WPP14
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HER17_RS17905 and HER17_RS17910 are separated by 28 nucleotides
HER17_RS17910 and HER17_RS17915 are separated by 65 nucleotides
HER17_RS17915 and HER17_RS17920 are separated by 68 nucleotides
HER17_RS17920 and HER17_RS17925 are separated by 19 nucleotides
HER17_RS17905: HER17_RS17905 - flavodoxin FldB, at 4,038,982 to 4,039,500
_RS17905
HER17_RS17910: HER17_RS17910 - hypothetical protein, at 4,039,529 to 4,039,852
_RS17910
HER17_RS17915: HER17_RS17915 - 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF, at 4,039,918 to 4,040,853
_RS17915
HER17_RS17920: HER17_RS17920 - membrane protein, at 4,040,922 to 4,041,296
_RS17920
HER17_RS17925: HER17_RS17925 - FAD assembly factor SdhE, at 4,041,316 to 4,041,582
_RS17925
Group
Condition
HER17
_RS17905
HER17
_RS17910
HER17
_RS17915
HER17
_RS17920
HER17
_RS17925
plant
Tuber-Atlantic
-1.0
-0.2
-0.4
-1.1
-1.3
carbon source
M9+glucose
-0.4
-0.2
-0.2
-1.6
+0.4
plant
Tuber-Atlantic
-0.0
-0.3
-0.1
-0.6
-0.8
carbon source
M9+polygalacturonate
-0.0
-0.1
-0.0
-0.1
-1.2
control
LB
-0.3
-0.1
-0.1
-0.1
-0.5
carbon source
M9+polygalacturonate
-0.1
+0.0
+0.1
-0.2
-0.9
control
LB
-0.1
-0.2
-0.1
-0.0
-0.7
control
LB
-0.3
+0.2
-0.1
-0.1
-0.7
plant
Tuber-Atlantic
-0.1
+0.3
-0.0
-0.3
-0.8
plant
Tuber-Atlantic
-0.2
+0.9
-0.7
-0.7
-0.1
control
LB
-0.0
-0.1
+0.1
-0.1
-0.7
control
LB
-0.0
+0.1
-0.0
-0.2
-0.6
carbon source
M9+polygalacturonate
+0.2
+0.1
-0.0
-0.2
-0.8
carbon source
M9+glycerol
-0.0
+0.0
-0.2
-0.3
-0.3
carbon source
M9+glycerol
-0.0
-0.2
-0.1
-0.4
-0.0
carbon source
M9+sucrose
-0.1
+0.2
-0.2
-0.2
-0.4
carbon source
M9+glucose+arginine
-0.4
+0.1
-0.0
-1.4
+1.1
control
LB
+0.1
+0.1
-0.0
-0.3
-0.4
carbon source
M9+glucose
-0.4
-0.1
-0.0
-1.1
+1.2
carbon source
M9+glucose+arginine
-0.2
+0.1
+0.3
-1.9
+1.3
carbon source
M9+starch
+0.1
+0.0
+0.0
-0.3
-0.2
carbon source
M9+glycerol
+0.2
+0.1
-0.2
-0.2
-0.3
carbon source
M9+starch
+0.1
-0.0
+0.0
-0.3
-0.1
carbon source
M9+sucrose
+0.1
-0.0
+0.1
-0.4
+0.0
carbon source
M9+glycerol
+0.1
+0.1
+0.0
-0.1
-0.3
carbon source
M9+glucose
-0.5
-0.2
+0.2
-1.4
+1.8
carbon source
M9+glycerol
+0.2
+0.1
+0.0
-0.5
+0.1
carbon source
M9+starch
+0.0
+0.0
-0.1
-0.1
+0.2
carbon source
M9+glucose+arginine
+0.1
+0.3
+0.1
-1.5
+1.1
carbon source
M9+sucrose
+0.1
+0.2
+0.3
-0.6
+0.3
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