Fitness for 5 genes in Pectobacterium carotovorum WPP14

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 31 experiments or choose conditions or try the comparative fitness browser

500 ntHER17_RS17565 and HER17_RS17570 are separated by 242 nucleotidesHER17_RS17570 and HER17_RS17575 are separated by 21 nucleotidesHER17_RS17575 and HER17_RS17580 are separated by 184 nucleotidesHER17_RS17580 and HER17_RS17585 are separated by 63 nucleotides HER17_RS17565: HER17_RS17565 - pyruvate:ferredoxin (flavodoxin) oxidoreductase, at 3,948,245 to 3,951,778 _RS17565 HER17_RS17570: HER17_RS17570 - cytochrome b561, at 3,952,021 to 3,952,557 _RS17570 HER17_RS17575: HER17_RS17575 - deaminated glutathione amidase, at 3,952,579 to 3,953,376 _RS17575 HER17_RS17580: HER17_RS17580 - L,D-transpeptidase family protein, at 3,953,561 to 3,954,628 _RS17580 HER17_RS17585: HER17_RS17585 - aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme, at 3,954,692 to 3,955,972 _RS17585
Group Condition HER17_RS17565 HER17_RS17570 HER17_RS17575 HER17_RS17580 HER17_RS17585
plant Tuber-Atlantic -0.3 -0.6 -0.5 -0.7 -0.1
plant Tuber-Atlantic -0.2 +0.1 +0.0 -1.0 -0.1
plant Tuber-Atlantic -0.3 +0.1 -0.2 -0.3 -0.1
carbon source M9+glucose+arginine -0.0 -0.3 -0.1 -0.1 +0.2
control LB +0.0 -0.2 -0.1 +0.1 -0.1
control LB -0.0 +0.0 -0.1 -0.0 -0.0
carbon source M9+glycerol -0.0 +0.0 -0.2 +0.2 -0.1
control LB -0.0 +0.1 -0.1 +0.0 -0.0
control LB +0.0 +0.1 -0.0 -0.0 -0.0
carbon source M9+glucose +0.2 -0.2 -0.1 -0.0 +0.2
carbon source M9+sucrose +0.0 +0.1 -0.1 -0.0 +0.1
control LB +0.1 -0.0 +0.1 -0.0 -0.0
carbon source M9+glycerol -0.0 -0.0 -0.0 +0.1 +0.0
carbon source M9+glycerol -0.1 -0.1 +0.1 +0.1 +0.1
carbon source M9+polygalacturonate +0.1 +0.1 -0.0 -0.0 +0.1
carbon source M9+sucrose +0.0 +0.2 -0.1 +0.1 +0.0
carbon source M9+glucose +0.1 +0.1 -0.1 +0.1 -0.0
carbon source M9+glucose+arginine +0.1 -0.0 +0.2 -0.0 -0.0
carbon source M9+polygalacturonate -0.0 +0.3 -0.1 +0.1 +0.1
carbon source M9+glycerol -0.0 +0.1 +0.1 +0.0 +0.1
carbon source M9+starch +0.1 +0.3 -0.1 +0.0 -0.1
carbon source M9+starch +0.1 +0.3 +0.0 -0.0 -0.0
control LB -0.1 +0.1 -0.0 +0.2 +0.1
carbon source M9+glycerol +0.1 +0.1 -0.1 +0.3 +0.0
carbon source M9+starch +0.1 +0.2 -0.1 +0.3 -0.1
carbon source M9+glucose+arginine +0.0 +0.4 +0.1 +0.0 -0.1
carbon source M9+polygalacturonate +0.1 +0.2 -0.0 +0.1 +0.1
carbon source M9+sucrose +0.1 +0.4 +0.3 +0.1 -0.0
plant Tuber-Atlantic -0.1 +0.5 +0.4 +0.0 +0.0
carbon source M9+glucose +0.1 +0.7 -0.0 +0.0 +0.2
remove
HER17_RS17565
plot		 remove
HER17_RS17570
plot		 remove
HER17_RS17575		 remove
HER17_RS17580
plot		 remove
HER17_RS17585
plot