Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Pectobacterium carotovorum WPP14
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 30 experiments (either direction), sorted by average fitness
Or view
all 31 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
HER17_RS17100 and HER17_RS17105 are separated by 196 nucleotides
HER17_RS17105 and HER17_RS17110 are separated by 37 nucleotides
HER17_RS17110 and HER17_RS17115 are separated by 179 nucleotides
HER17_RS17115 and HER17_RS17120 are separated by 490 nucleotides
HER17_RS17100: HER17_RS17100 - Sua5/YciO/YrdC/YwlC family protein, at 3,849,747 to 3,850,526
_RS17100
HER17_RS17105: HER17_RS17105 - DNA-3-methyladenine glycosylase, at 3,850,723 to 3,851,385
_RS17105
HER17_RS17110: HER17_RS17110 - multidrug/biocide efflux PACE transporter, at 3,851,423 to 3,851,890
_RS17110
HER17_RS17115: HER17_RS17115 - LysR family transcriptional regulator, at 3,852,070 to 3,852,948
_RS17115
HER17_RS17120: HER17_RS17120 - fumarate hydratase, at 3,853,439 to 3,855,082
_RS17120
Group
Condition
HER17
_RS17100
HER17
_RS17105
HER17
_RS17110
HER17
_RS17115
HER17
_RS17120
plant
Tuber-Atlantic
-0.4
+0.2
-0.3
-0.2
+0.0
carbon source
M9+sucrose
-0.1
-0.2
-0.1
-0.2
-0.1
carbon source
M9+starch
-0.1
-0.0
-0.2
-0.2
-0.2
carbon source
M9+polygalacturonate
-0.2
-0.1
+0.1
-0.0
-0.3
control
LB
-0.2
-0.1
-0.1
-0.0
-0.0
carbon source
M9+glucose
-0.3
-0.1
-0.2
+0.1
+0.2
carbon source
M9+glycerol
+0.0
-0.1
-0.2
+0.0
-0.1
control
LB
-0.1
-0.2
-0.0
+0.1
-0.0
carbon source
M9+glycerol
-0.1
-0.2
-0.0
+0.1
+0.0
control
LB
-0.1
-0.0
-0.1
+0.1
-0.1
carbon source
M9+glucose+arginine
-0.1
-0.0
+0.2
-0.1
-0.0
carbon source
M9+starch
+0.0
+0.1
+0.1
-0.3
-0.1
carbon source
M9+sucrose
-0.1
+0.0
+0.0
-0.1
-0.1
carbon source
M9+glucose
-0.2
+0.0
-0.0
+0.1
+0.0
carbon source
M9+glucose+arginine
-0.0
+0.1
-0.1
-0.2
+0.1
carbon source
M9+polygalacturonate
+0.0
+0.1
-0.0
-0.0
-0.1
carbon source
M9+polygalacturonate
-0.0
+0.3
-0.0
-0.1
-0.1
carbon source
M9+starch
+0.1
+0.1
+0.0
-0.1
-0.1
carbon source
M9+glycerol
+0.0
-0.0
-0.1
+0.1
+0.0
control
LB
+0.1
-0.0
+0.1
+0.1
-0.1
carbon source
M9+glucose
+0.3
-0.1
-0.0
-0.2
+0.1
carbon source
M9+glycerol
+0.0
+0.1
-0.1
+0.1
-0.0
plant
Tuber-Atlantic
+0.1
+0.1
-0.1
-0.0
+0.1
control
LB
-0.1
+0.2
-0.0
+0.2
-0.0
control
LB
+0.0
+0.3
-0.0
+0.1
-0.1
carbon source
M9+glycerol
+0.1
+0.2
-0.0
+0.1
+0.0
plant
Tuber-Atlantic
+0.0
-0.3
-0.1
+0.6
+0.2
carbon source
M9+sucrose
+0.1
+0.1
+0.1
+0.0
+0.1
plant
Tuber-Atlantic
+0.1
-0.0
+0.2
-0.2
+0.3
carbon source
M9+glucose+arginine
-0.1
+0.3
+0.1
+0.1
+0.3
remove
HER17_RS17100
plot
remove
HER17_RS17105
plot
remove
HER17_RS17110
remove
HER17_RS17115
plot
remove
HER17_RS17120
plot