Fitness for 5 genes in Pectobacterium carotovorum WPP14

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500 ntHER17_RS17075 and HER17_RS17080 are separated by 65 nucleotidesHER17_RS17080 and HER17_RS17085 are separated by 41 nucleotidesHER17_RS17085 and HER17_RS17090 are separated by 51 nucleotidesHER17_RS17090 and HER17_RS17095 are separated by 29 nucleotides HER17_RS17075: HER17_RS17075 - MFS transporter, at 3,844,299 to 3,845,675 _RS17075 HER17_RS17080: HER17_RS17080 - FMN-binding protein, at 3,845,741 to 3,846,088 _RS17080 HER17_RS17085: HER17_RS17085 - FAD-dependent oxidoreductase, at 3,846,130 to 3,847,659 _RS17085 HER17_RS17090: HER17_RS17090 - DNA oxidative demethylase AlkB, at 3,847,711 to 3,848,367 _RS17090 HER17_RS17095: HER17_RS17095 - bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada, at 3,848,397 to 3,849,464 _RS17095
Group Condition HER17_RS17075 HER17_RS17080 HER17_RS17085 HER17_RS17090 HER17_RS17095
plant Tuber-Atlantic -0.1 +0.7 +0.0 -1.3 -0.4
carbon source M9+glucose +0.0 -0.5 +0.1 -0.6 +0.2
carbon source M9+starch +0.0 -0.2 +0.2 -0.4 -0.2
carbon source M9+sucrose -0.1 -0.1 -0.1 -0.3 +0.0
carbon source M9+polygalacturonate -0.0 -0.2 +0.1 -0.4 -0.1
carbon source M9+glycerol +0.1 -0.0 -0.0 -0.4 -0.2
carbon source M9+polygalacturonate +0.1 -0.3 +0.1 -0.2 -0.1
carbon source M9+glucose -0.0 -0.5 +0.0 +0.1 -0.1
carbon source M9+glucose+arginine +0.2 -0.3 -0.1 -0.3 +0.2
carbon source M9+glucose+arginine +0.1 -0.4 +0.0 +0.0 -0.1
carbon source M9+polygalacturonate +0.1 -0.1 +0.0 -0.5 +0.2
carbon source M9+glycerol +0.0 -0.2 -0.1 +0.0 -0.1
plant Tuber-Atlantic -0.0 -0.0 -0.1 +0.3 -0.3
control LB +0.0 -0.2 -0.0 +0.3 -0.0
carbon source M9+glycerol +0.0 -0.1 -0.0 +0.3 -0.2
carbon source M9+glucose+arginine -0.2 -0.1 -0.1 +0.3 +0.1
carbon source M9+glucose +0.1 -0.1 -0.0 +0.2 -0.1
carbon source M9+sucrose +0.1 -0.1 +0.1 -0.1 +0.1
carbon source M9+starch +0.0 -0.2 +0.0 +0.1 +0.1
control LB -0.0 +0.2 +0.0 +0.1 -0.2
carbon source M9+glycerol +0.1 +0.0 -0.1 +0.3 -0.1
control LB -0.1 -0.0 +0.0 +0.2 +0.0
carbon source M9+starch +0.2 +0.0 +0.0 -0.0 +0.1
carbon source M9+glycerol +0.0 +0.1 -0.0 +0.2 +0.0
carbon source M9+sucrose +0.0 -0.0 -0.0 +0.3 +0.0
control LB -0.1 +0.1 -0.0 +0.5 -0.2
plant Tuber-Atlantic +0.1 -0.4 -0.0 +0.2 +0.5
control LB -0.1 +0.0 +0.0 +0.3 +0.2
plant Tuber-Atlantic +0.2 -0.1 +0.0 +0.3 +0.1
carbon source M9+glycerol -0.0 +0.2 +0.0 +0.4 +0.1
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