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Protein
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Fitness for 5 genes in
Pectobacterium carotovorum WPP14
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HER17_RS16870 and HER17_RS16875 are separated by 277 nucleotides
HER17_RS16875 and HER17_RS16880 are separated by 294 nucleotides
HER17_RS16880 and HER17_RS16885 are separated by 266 nucleotides
HER17_RS16885 and HER17_RS16890 are separated by 210 nucleotides
HER17_RS16870: HER17_RS16870 - TetR/AcrR family transcriptional regulator, at 3,797,145 to 3,797,744
_RS16870
HER17_RS16875: HER17_RS16875 - hypothetical protein, at 3,798,022 to 3,798,588
_RS16875
HER17_RS16880: HER17_RS16880 - HPP family protein, at 3,798,883 to 3,799,281
_RS16880
HER17_RS16885: HER17_RS16885 - TetR family transcriptional regulator, at 3,799,548 to 3,800,114
_RS16885
HER17_RS16890: HER17_RS16890 - VOC family protein, at 3,800,325 to 3,800,726
_RS16890
Group
Condition
HER17
_RS16870
HER17
_RS16875
HER17
_RS16880
HER17
_RS16885
HER17
_RS16890
plant
Tuber-Atlantic
-0.0
-0.6
+0.1
-0.2
-0.3
control
LB
-0.0
-0.6
+0.0
-0.2
-0.1
carbon source
M9+polygalacturonate
-0.1
-0.4
+0.0
-0.1
-0.2
carbon source
M9+glucose
-0.7
-0.4
+0.1
+0.1
+0.1
plant
Tuber-Atlantic
-0.9
-0.9
+1.1
-0.2
+0.0
carbon source
M9+glycerol
+0.2
-0.5
-0.1
-0.2
-0.2
carbon source
M9+glycerol
+0.2
-0.6
+0.1
-0.2
-0.2
carbon source
M9+polygalacturonate
-0.2
-0.2
+0.0
-0.1
-0.2
carbon source
M9+glucose+arginine
-0.3
-0.4
+0.1
+0.1
-0.1
control
LB
-0.0
-0.3
+0.1
-0.2
-0.2
control
LB
+0.1
-0.7
-0.1
+0.1
-0.1
control
LB
-0.0
-0.2
-0.1
-0.2
+0.0
carbon source
M9+glucose+arginine
-0.2
-0.4
+0.2
-0.1
-0.2
carbon source
M9+glucose
-0.1
-1.1
-0.1
+0.4
+0.4
plant
Tuber-Atlantic
-0.0
-0.6
+0.1
-0.1
+0.2
carbon source
M9+starch
-0.1
-0.4
-0.0
+0.1
+0.1
carbon source
M9+starch
-0.1
+0.0
-0.1
+0.1
-0.3
control
LB
-0.1
-0.2
+0.0
-0.3
+0.0
carbon source
M9+sucrose
+0.2
-0.2
+0.0
-0.3
-0.1
plant
Tuber-Atlantic
-0.1
+0.3
+0.1
-0.2
-0.4
carbon source
M9+sucrose
-0.1
-0.1
-0.1
-0.1
+0.2
carbon source
M9+glucose
-0.5
-0.1
+0.1
+0.0
+0.2
carbon source
M9+glycerol
+0.2
-0.3
+0.1
-0.1
-0.1
carbon source
M9+glycerol
+0.2
-0.1
-0.1
+0.0
-0.0
carbon source
M9+starch
-0.1
+0.3
+0.1
-0.1
-0.2
carbon source
M9+glycerol
+0.1
-0.3
+0.1
+0.2
+0.2
carbon source
M9+polygalacturonate
-0.1
+0.4
+0.2
+0.0
-0.1
carbon source
M9+sucrose
-0.1
+0.5
+0.1
-0.0
+0.0
carbon source
M9+glycerol
+0.3
+0.2
+0.1
+0.0
+0.0
carbon source
M9+glucose+arginine
+0.1
+0.2
+0.1
+0.2
+0.2
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HER17_RS16880
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