Fitness for 5 genes in Pectobacterium carotovorum WPP14

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500 ntHER17_RS15920 and HER17_RS15925 are separated by 252 nucleotidesHER17_RS15925 and HER17_RS15930 overlap by 4 nucleotidesHER17_RS15930 and HER17_RS15935 are separated by 18 nucleotidesHER17_RS15935 and HER17_RS15940 are separated by 68 nucleotides HER17_RS15920: HER17_RS15920 - tRNA 4-thiouridine(8) synthase ThiI, at 3,576,097 to 3,577,545 _RS15920 HER17_RS15925: HER17_RS15925 - exodeoxyribonuclease VII small subunit, at 3,577,798 to 3,578,046 _RS15925 HER17_RS15930: HER17_RS15930 - (2E,6E)-farnesyl diphosphate synthase, at 3,578,043 to 3,578,954 _RS15930 HER17_RS15935: HER17_RS15935 - 1-deoxy-D-xylulose-5-phosphate synthase, at 3,578,973 to 3,580,838 _RS15935 HER17_RS15940: HER17_RS15940 - phosphatidylglycerophosphatase A, at 3,580,907 to 3,581,443 _RS15940
Group Condition HER17_RS15920 HER17_RS15925 HER17_RS15930 HER17_RS15935 HER17_RS15940
carbon source M9+sucrose -0.7 -1.4 N.D. N.D. +0.1
control LB -0.2 -0.4 N.D. N.D. -1.3
control LB -0.0 +0.1 N.D. N.D. -1.5
plant Tuber-Atlantic -0.7 -0.9 N.D. N.D. +0.2
control LB -0.0 -0.8 N.D. N.D. -0.5
control LB -0.2 -0.9 N.D. N.D. -0.2
carbon source M9+polygalacturonate -1.0 -0.3 N.D. N.D. +0.3
carbon source M9+polygalacturonate -0.8 -0.1 N.D. N.D. +0.0
plant Tuber-Atlantic -0.6 -0.6 N.D. N.D. +0.4
control LB -0.1 -0.2 N.D. N.D. -0.4
carbon source M9+starch -0.0 -0.9 N.D. N.D. +0.3
carbon source M9+glycerol -0.2 -0.2 N.D. N.D. -0.2
carbon source M9+polygalacturonate -1.0 -0.1 N.D. N.D. +0.7
carbon source M9+glycerol -0.2 +0.5 N.D. N.D. -0.5
control LB -0.1 +0.3 N.D. N.D. -0.2
carbon source M9+sucrose -0.4 +0.5 N.D. N.D. -0.1
carbon source M9+sucrose -0.4 +0.1 N.D. N.D. +0.3
carbon source M9+starch -0.1 +0.3 N.D. N.D. -0.0
plant Tuber-Atlantic +0.2 -0.9 N.D. N.D. +1.0
carbon source M9+glucose+arginine -0.7 +0.3 N.D. N.D. +0.7
carbon source M9+starch +0.1 -0.3 N.D. N.D. +0.5
carbon source M9+glycerol -0.2 +0.5 N.D. N.D. +0.1
carbon source M9+glycerol +0.1 +0.7 N.D. N.D. -0.2
carbon source M9+glycerol -0.2 +1.2 N.D. N.D. -0.3
carbon source M9+glucose+arginine -0.4 +0.3 N.D. N.D. +1.0
carbon source M9+glucose -0.4 +0.1 N.D. N.D. +1.3
plant Tuber-Atlantic -0.5 +1.2 N.D. N.D. +0.6
carbon source M9+glucose -0.6 +1.0 N.D. N.D. +1.2
carbon source M9+glucose -0.5 +0.7 N.D. N.D. +1.3
carbon source M9+glucose+arginine -0.5 +1.0 N.D. N.D. +1.3
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