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Protein
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Fitness for 5 genes in
Pectobacterium carotovorum WPP14
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HER17_RS15855 and HER17_RS15860 are separated by 314 nucleotides
HER17_RS15860 and HER17_RS15865 are separated by 335 nucleotides
HER17_RS15865 and HER17_RS15870 are separated by 59 nucleotides
HER17_RS15870 and HER17_RS15875 are separated by 424 nucleotides
HER17_RS15855: HER17_RS15855 - trigger factor, at 3,562,709 to 3,564,013
_RS15855
HER17_RS15860: HER17_RS15860 - transcriptional regulator BolA, at 3,564,328 to 3,564,642
_RS15860
HER17_RS15865: HER17_RS15865 - lipoprotein, at 3,564,978 to 3,565,556
_RS15865
HER17_RS15870: HER17_RS15870 - muropeptide MFS transporter AmpG, at 3,565,616 to 3,567,103
_RS15870
HER17_RS15875: HER17_RS15875 - cytochrome o ubiquinol oxidase subunit II, at 3,567,528 to 3,568,490
_RS15875
Group
Condition
HER17
_RS15855
HER17
_RS15860
HER17
_RS15865
HER17
_RS15870
HER17
_RS15875
control
LB
-0.5
+0.1
-0.1
-0.1
-1.0
plant
Tuber-Atlantic
-0.3
-0.0
-0.3
+0.2
-1.0
control
LB
-0.6
+0.0
-0.2
-0.1
-0.3
control
LB
-0.3
+0.1
-0.2
+0.0
-0.7
plant
Tuber-Atlantic
-0.3
-0.6
+0.3
+0.2
-0.6
control
LB
-0.2
-0.2
-0.2
+0.0
-0.5
control
LB
-0.3
+0.0
-0.2
-0.0
-0.2
control
LB
-0.3
+0.0
-0.3
-0.1
-0.1
plant
Tuber-Atlantic
-0.7
-0.2
+0.2
-0.1
+0.1
carbon source
M9+sucrose
+0.0
-0.2
-0.1
+0.3
-0.6
carbon source
M9+polygalacturonate
+0.3
-0.1
+0.1
-0.1
-0.8
carbon source
M9+glycerol
-0.0
+0.0
-0.0
+0.1
-0.5
carbon source
M9+glycerol
+0.0
-0.1
-0.2
+0.0
-0.2
carbon source
M9+glycerol
+0.1
+0.0
+0.1
-0.0
-0.6
carbon source
M9+starch
-0.2
-0.0
+0.1
+0.1
-0.4
carbon source
M9+glucose+arginine
-1.0
+0.2
-0.1
+0.3
+0.4
carbon source
M9+glycerol
+0.3
-0.0
-0.1
+0.2
-0.6
carbon source
M9+sucrose
+0.1
-0.1
+0.2
+0.1
-0.4
carbon source
M9+polygalacturonate
+0.2
-0.0
-0.1
+0.1
-0.4
carbon source
M9+glycerol
+0.4
-0.1
+0.0
+0.2
-0.5
carbon source
M9+starch
+0.2
-0.0
+0.1
+0.2
-0.4
carbon source
M9+polygalacturonate
+0.3
+0.1
+0.0
+0.1
-0.5
carbon source
M9+glycerol
+0.1
+0.1
-0.1
+0.1
-0.1
carbon source
M9+sucrose
-0.1
-0.1
+0.2
+0.3
-0.2
plant
Tuber-Atlantic
-0.9
-0.1
+0.6
+0.1
+0.6
carbon source
M9+glucose+arginine
-0.4
+0.2
+0.4
+0.5
-0.0
carbon source
M9+glucose
-0.9
-0.0
+0.4
+0.4
+0.9
carbon source
M9+glucose+arginine
-0.9
+0.1
+0.0
+0.6
+1.0
carbon source
M9+glucose
-0.4
+0.4
-0.1
+0.3
+0.5
carbon source
M9+glucose
-0.7
+0.1
+0.4
+0.7
+0.9
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HER17_RS15865
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