Fitness for 5 genes in Pectobacterium carotovorum WPP14

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500 ntHER17_RS15485 and HER17_RS15490 are separated by 267 nucleotidesHER17_RS15490 and HER17_RS15495 overlap by 4 nucleotidesHER17_RS15495 and HER17_RS15500 overlap by 75 nucleotidesHER17_RS15500 and HER17_RS15505 are separated by 28 nucleotides HER17_RS15485: HER17_RS15485 - spermidine N1-acetyltransferase, at 3,471,839 to 3,472,414 _RS15485 HER17_RS15490: HER17_RS15490 - ABC transporter permease, at 3,472,682 to 3,475,111 _RS15490 HER17_RS15495: HER17_RS15495 - ABC transporter ATP-binding protein, at 3,475,108 to 3,475,839 _RS15495 HER17_RS15500: HER17_RS15500 - multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1, at 3,475,765 to 3,476,445 _RS15500 HER17_RS15505: HER17_RS15505 - SDR family oxidoreductase, at 3,476,474 to 3,477,244 _RS15505
Group Condition HER17_RS15485 HER17_RS15490 HER17_RS15495 HER17_RS15500 HER17_RS15505
plant Tuber-Atlantic -0.1 -0.0 -0.2 -0.2 +0.0
control LB -0.3 +0.0 +0.0 +0.0 -0.1
control LB -0.0 +0.0 -0.0 -0.1 -0.2
carbon source M9+glycerol +0.1 -0.0 -0.1 -0.2 -0.0
carbon source M9+glycerol -0.0 +0.1 -0.2 +0.1 +0.0
carbon source M9+glucose+arginine -0.1 -0.1 +0.2 -0.2 +0.3
carbon source M9+glucose -0.3 +0.1 +0.2 -0.1 +0.1
carbon source M9+starch -0.0 -0.0 +0.2 +0.1 -0.1
carbon source M9+glucose +0.0 +0.1 -0.4 +0.1 +0.2
control LB +0.1 +0.0 -0.1 -0.0 +0.0
carbon source M9+sucrose -0.2 +0.0 +0.2 +0.1 -0.0
plant Tuber-Atlantic -0.1 +0.1 -0.0 -0.1 +0.1
control LB +0.0 +0.1 +0.0 +0.0 -0.1
control LB -0.1 +0.1 +0.0 +0.1 +0.0
carbon source M9+glucose +0.2 +0.0 -0.1 +0.2 -0.1
carbon source M9+polygalacturonate -0.1 +0.1 +0.0 +0.1 +0.1
carbon source M9+sucrose -0.1 +0.1 +0.2 +0.0 -0.0
carbon source M9+polygalacturonate -0.1 +0.1 -0.2 +0.1 +0.3
control LB +0.1 +0.1 -0.0 +0.1 -0.0
carbon source M9+glycerol +0.1 +0.1 +0.1 -0.1 +0.1
carbon source M9+glycerol +0.0 +0.1 +0.0 -0.1 +0.1
carbon source M9+glycerol +0.1 +0.1 -0.1 +0.2 -0.1
carbon source M9+starch -0.1 +0.1 +0.2 +0.0 -0.1
carbon source M9+glucose+arginine -0.1 +0.0 +0.3 +0.1 +0.0
carbon source M9+starch -0.0 +0.1 -0.0 +0.1 +0.1
carbon source M9+glycerol +0.0 +0.1 +0.2 +0.0 +0.0
carbon source M9+sucrose +0.0 +0.1 +0.1 +0.1 +0.2
plant Tuber-Atlantic -0.1 +0.0 +0.0 +0.4 +0.2
carbon source M9+glucose+arginine -0.1 +0.3 +0.2 -0.0 +0.3
plant Tuber-Atlantic +0.2 +0.1 +0.1 -0.1 +0.6
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