Fitness for 5 genes in Pectobacterium carotovorum WPP14

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500 ntHER17_RS14565 and HER17_RS14570 are separated by 1 nucleotidesHER17_RS14570 and HER17_RS14575 are separated by 48 nucleotidesHER17_RS14575 and HER17_RS14580 overlap by 4 nucleotidesHER17_RS14580 and HER17_RS14585 overlap by 4 nucleotides HER17_RS14565: HER17_RS14565 - oligosaccharide repeat unit polymerase, at 3,275,988 to 3,277,193 _RS14565 HER17_RS14570: HER17_RS14570 - glycosyltransferase, at 3,277,195 to 3,278,055 _RS14570 HER17_RS14575: HER17_RS14575 - O-antigen translocase, at 3,278,104 to 3,279,369 _RS14575 HER17_RS14580: HER17_RS14580 - DegT/DnrJ/EryC1/StrS family aminotransferase, at 3,279,366 to 3,280,478 _RS14580 HER17_RS14585: HER17_RS14585 - formyl transferase, at 3,280,475 to 3,281,668 _RS14585
Group Condition HER17_RS14565 HER17_RS14570 HER17_RS14575 HER17_RS14580 HER17_RS14585
plant Tuber-Atlantic -1.7 -0.3 -0.1 -1.5 N.D.
control LB +0.3 -0.5 -0.8 -1.3 N.D.
carbon source M9+glycerol -0.8 -0.0 -0.7 -0.6 N.D.
carbon source M9+glycerol -0.1 -0.7 -0.5 -0.5 N.D.
carbon source M9+glycerol -0.7 -0.6 -0.6 +0.1 N.D.
plant Tuber-Atlantic -1.7 +1.1 +0.3 -1.3 N.D.
control LB +0.4 -0.9 -0.1 -1.0 N.D.
control LB +0.5 -0.6 -0.6 -0.8 N.D.
carbon source M9+glycerol -0.1 -0.5 -0.9 -0.0 N.D.
carbon source M9+glycerol -0.1 -0.2 -0.2 -0.6 N.D.
control LB +0.3 -0.5 -0.3 -0.6 N.D.
control LB +0.3 -0.3 -0.3 -0.6 N.D.
control LB +0.4 -0.6 -0.2 -0.1 N.D.
carbon source M9+sucrose +0.1 +0.3 -0.3 -0.3 N.D.
carbon source M9+starch -0.1 +0.4 -0.2 -0.2 N.D.
carbon source M9+glycerol -0.3 +0.1 +0.0 +0.3 N.D.
carbon source M9+polygalacturonate +0.2 -0.2 +0.3 +0.2 N.D.
carbon source M9+polygalacturonate +0.2 +0.2 +0.1 +0.1 N.D.
carbon source M9+polygalacturonate +0.3 +0.1 +0.3 -0.1 N.D.
carbon source M9+sucrose -0.3 +0.7 +0.2 +0.3 N.D.
carbon source M9+starch +0.1 +0.8 -0.2 +0.2 N.D.
carbon source M9+sucrose +0.3 +1.0 +0.0 -0.2 N.D.
carbon source M9+glucose +0.2 +0.2 +1.9 +1.7 N.D.
carbon source M9+glucose+arginine -0.1 +1.6 +1.0 +1.5 N.D.
carbon source M9+glucose+arginine +0.2 +1.4 +1.3 +1.1 N.D.
plant Tuber-Atlantic -1.2 +0.5 +3.8 +1.0 N.D.
carbon source M9+glucose +0.4 +1.2 +1.7 +1.1 N.D.
carbon source M9+glucose +0.5 +0.7 +1.5 +2.0 N.D.
carbon source M9+glucose+arginine -0.1 +1.6 +1.7 +1.6 N.D.
plant Tuber-Atlantic -0.4 +2.6 +3.2 +0.9 N.D.
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