Fitness for 5 genes in Pectobacterium carotovorum WPP14

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 31 experiments or choose conditions or try the comparative fitness browser

500 ntHER17_RS14340 and HER17_RS14345 are separated by 183 nucleotidesHER17_RS14345 and HER17_RS14350 are separated by 441 nucleotidesHER17_RS14350 and HER17_RS14355 overlap by 1 nucleotidesHER17_RS14355 and HER17_RS14360 are separated by 94 nucleotides HER17_RS14340: HER17_RS14340 - DUF1869 domain-containing protein, at 3,223,597 to 3,223,941 _RS14340 HER17_RS14345: HER17_RS14345 - sensor domain-containing diguanylate cyclase, at 3,224,125 to 3,225,189 _RS14345 HER17_RS14350: HER17_RS14350 - beta-glucoside-specific PTS transporter subunit IIABC, at 3,225,631 to 3,227,496 _RS14350 HER17_RS14355: HER17_RS14355 - family 1 glycosylhydrolase, at 3,227,496 to 3,228,959 _RS14355 HER17_RS14360: HER17_RS14360 - PRD domain-containing protein, at 3,229,054 to 3,229,893 _RS14360
Group Condition HER17_RS14340 HER17_RS14345 HER17_RS14350 HER17_RS14355 HER17_RS14360
plant Tuber-Atlantic -1.2 -0.1 -0.1 -0.1 -0.1
carbon source M9+glucose+arginine -0.8 -0.2 -0.1 -0.1 -0.1
plant Tuber-Atlantic -1.2 +0.3 +0.1 -0.1 -0.1
carbon source M9+glucose -0.6 -0.1 -0.1 -0.3 +0.0
plant Tuber-Atlantic -1.0 +0.0 +0.1 -0.1 +0.0
carbon source M9+polygalacturonate -0.0 -0.3 -0.2 -0.2 +0.0
carbon source M9+glucose -0.3 -0.2 -0.2 -0.1 +0.1
control LB -0.6 -0.1 -0.0 -0.1 +0.2
control LB -0.3 +0.0 -0.1 -0.1 -0.0
control LB -0.4 -0.1 -0.0 -0.0 -0.0
carbon source M9+glucose+arginine -0.6 -0.0 +0.2 -0.3 +0.1
carbon source M9+glucose+arginine -0.1 -0.2 -0.4 -0.2 +0.3
carbon source M9+glycerol -0.2 -0.0 -0.1 +0.0 -0.0
carbon source M9+glycerol -0.3 +0.1 -0.0 -0.1 -0.1
carbon source M9+glycerol -0.2 -0.1 -0.0 -0.1 +0.1
carbon source M9+polygalacturonate -0.1 -0.1 +0.0 -0.1 +0.0
control LB -0.2 -0.0 -0.0 +0.0 +0.1
carbon source M9+polygalacturonate +0.2 -0.2 +0.1 -0.1 -0.0
carbon source M9+glycerol -0.2 -0.2 +0.0 +0.0 +0.1
carbon source M9+sucrose -0.0 -0.1 -0.1 +0.0 +0.0
carbon source M9+sucrose +0.4 +0.0 -0.1 -0.2 -0.2
carbon source M9+starch +0.2 -0.1 +0.0 -0.2 -0.0
carbon source M9+glycerol +0.0 +0.1 +0.1 -0.1 -0.1
control LB +0.2 -0.1 -0.0 -0.1 +0.0
carbon source M9+sucrose +0.5 -0.0 -0.1 -0.1 -0.0
carbon source M9+starch +0.4 -0.1 -0.0 -0.1 +0.1
carbon source M9+starch +0.6 -0.2 -0.0 -0.2 +0.1
carbon source M9+glycerol +0.5 +0.0 +0.0 -0.0 -0.1
carbon source M9+glucose +0.8 -0.2 -0.1 +0.1 -0.0
plant Tuber-Atlantic -0.0 +0.3 +0.4 -0.0 +0.2
remove
HER17_RS14340
plot
remove
HER17_RS14345
plot
remove
HER17_RS14350
remove
HER17_RS14355
plot
remove
HER17_RS14360
plot