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Protein
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Fitness for 5 genes in
Pectobacterium carotovorum WPP14
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HER17_RS14270 and HER17_RS14275 are separated by 225 nucleotides
HER17_RS14275 and HER17_RS14280 are separated by 313 nucleotides
HER17_RS14280 and HER17_RS14285 are separated by 136 nucleotides
HER17_RS14285 and HER17_RS14290 are separated by 142 nucleotides
HER17_RS14270: HER17_RS14270 - ferric ABC transporter ATP-binding protein, at 3,207,729 to 3,208,787
_RS14270
HER17_RS14275: HER17_RS14275 - LacI family DNA-binding transcriptional regulator, at 3,209,013 to 3,210,089
_RS14275
HER17_RS14280: HER17_RS14280 - beta-galactosidase, at 3,210,403 to 3,213,534
_RS14280
HER17_RS14285: HER17_RS14285 - MFS transporter, at 3,213,671 to 3,214,933
_RS14285
HER17_RS14290: HER17_RS14290 - tRNA-Asn, at 3,215,076 to 3,215,151
_RS14290
Group
Condition
HER17
_RS14270
HER17
_RS14275
HER17
_RS14280
HER17
_RS14285
HER17
_RS14290
plant
Tuber-Atlantic
+0.0
+0.9
-0.4
-0.5
-3.1
plant
Tuber-Atlantic
+0.0
+0.3
-0.3
-0.5
-1.7
carbon source
M9+glucose
-0.3
-0.3
+0.0
+0.1
-1.1
carbon source
M9+glucose
-0.0
-0.2
-0.2
+0.1
-1.1
carbon source
M9+glucose
+0.3
-0.6
+0.0
-0.1
-1.0
carbon source
M9+starch
-0.0
-0.2
-0.0
+0.1
-0.9
carbon source
M9+glucose+arginine
+0.1
+0.0
-0.2
+0.2
-1.0
control
LB
+0.2
-0.1
-0.1
-0.1
-0.8
control
LB
+0.0
+0.0
-0.1
-0.1
-0.8
carbon source
M9+sucrose
-0.1
-0.1
+0.0
-0.1
-0.6
carbon source
M9+glucose+arginine
+0.0
-0.1
+0.1
-0.1
-0.6
carbon source
M9+starch
+0.1
-0.2
-0.0
+0.0
-0.4
carbon source
M9+glucose+arginine
+0.1
-0.4
-0.0
-0.2
+0.2
carbon source
M9+glycerol
+0.1
+0.1
+0.0
+0.1
-0.6
carbon source
M9+glycerol
-0.0
-0.1
+0.0
+0.0
-0.3
control
LB
-0.1
-0.0
-0.1
+0.1
-0.2
carbon source
M9+polygalacturonate
-0.0
-0.0
+0.1
+0.0
-0.3
carbon source
M9+glycerol
+0.2
+0.2
-0.0
+0.1
-0.7
carbon source
M9+glycerol
+0.1
+0.0
+0.0
-0.1
-0.2
carbon source
M9+starch
+0.0
-0.1
+0.1
+0.1
-0.4
plant
Tuber-Atlantic
+0.2
+0.2
-0.2
-0.2
-0.1
carbon source
M9+sucrose
-0.0
+0.1
+0.1
+0.0
-0.3
carbon source
M9+sucrose
+0.2
-0.2
-0.1
+0.0
-0.0
carbon source
M9+polygalacturonate
+0.2
-0.2
+0.1
-0.0
-0.1
carbon source
M9+glycerol
+0.1
-0.0
-0.0
+0.2
-0.3
carbon source
M9+glycerol
+0.1
+0.1
+0.0
-0.0
-0.2
control
LB
+0.1
-0.1
+0.0
+0.0
+0.1
plant
Tuber-Atlantic
-0.2
+0.8
-0.4
-0.2
+0.2
control
LB
+0.1
-0.1
+0.0
+0.1
+0.2
carbon source
M9+polygalacturonate
+0.1
+0.2
+0.1
-0.1
+0.3
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