Fitness for 5 genes in Pectobacterium carotovorum WPP14

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500 ntHER17_RS14080 and HER17_RS14085 are separated by 2 nucleotidesHER17_RS14085 and HER17_RS14090 are separated by 717 nucleotidesHER17_RS14090 and HER17_RS14095 are separated by 43 nucleotidesHER17_RS14095 and HER17_RS14100 overlap by 4 nucleotides HER17_RS14080: HER17_RS14080 - HlyD family type I secretion periplasmic adaptor subunit, at 3,158,820 to 3,160,178 _RS14080 HER17_RS14085: HER17_RS14085 - TolC family outer membrane protein, at 3,160,181 to 3,161,536 _RS14085 HER17_RS14090: HER17_RS14090 - anaerobic C4-dicarboxylate transporter, at 3,162,254 to 3,163,594 _RS14090 HER17_RS14095: HER17_RS14095 - amino acid racemase, at 3,163,638 to 3,164,354 _RS14095 HER17_RS14100: HER17_RS14100 - D-cysteine desulfhydrase, at 3,164,351 to 3,165,364 _RS14100
Group Condition HER17_RS14080 HER17_RS14085 HER17_RS14090 HER17_RS14095 HER17_RS14100
carbon source M9+glucose +0.0 -0.4 +0.0 -0.3 -0.2
carbon source M9+glucose+arginine -0.0 -0.1 -0.1 -0.4 -0.1
carbon source M9+glucose+arginine -0.1 -0.0 +0.0 -0.2 -0.1
carbon source M9+polygalacturonate +0.1 -0.1 +0.0 -0.3 -0.1
carbon source M9+glucose+arginine -0.0 -0.0 -0.0 -0.1 -0.1
control LB +0.0 -0.1 +0.1 -0.1 -0.2
carbon source M9+glycerol +0.2 -0.0 -0.1 -0.3 -0.1
carbon source M9+starch +0.1 -0.1 +0.0 -0.1 -0.1
control LB +0.1 -0.1 +0.0 -0.0 -0.1
control LB +0.1 -0.2 +0.0 -0.0 -0.0
carbon source M9+polygalacturonate -0.1 -0.1 -0.1 +0.1 -0.0
carbon source M9+glucose -0.1 -0.0 +0.1 -0.1 +0.0
control LB +0.1 -0.1 +0.0 +0.1 -0.2
carbon source M9+glycerol -0.0 +0.0 +0.0 -0.2 +0.1
carbon source M9+starch +0.1 -0.0 -0.0 -0.0 -0.0
plant Tuber-Atlantic +0.2 -0.5 -0.1 +0.0 +0.4
carbon source M9+polygalacturonate +0.2 -0.1 -0.0 -0.1 +0.1
carbon source M9+glycerol +0.3 -0.0 -0.1 +0.1 -0.2
plant Tuber-Atlantic +0.1 +0.2 -0.2 -0.1 +0.1
carbon source M9+sucrose +0.1 -0.0 -0.1 -0.0 +0.1
carbon source M9+sucrose +0.2 +0.0 -0.1 -0.0 +0.0
carbon source M9+glycerol +0.1 +0.0 -0.0 +0.2 -0.1
carbon source M9+glucose +0.3 -0.2 -0.1 +0.1 +0.1
plant Tuber-Atlantic +0.1 +0.1 -0.0 -0.0 +0.2
carbon source M9+glycerol +0.3 -0.0 +0.1 -0.0 -0.0
control LB +0.1 +0.0 +0.1 +0.1 -0.0
carbon source M9+glycerol +0.1 +0.1 -0.0 +0.1 +0.0
carbon source M9+sucrose +0.2 -0.1 +0.0 +0.3 +0.0
control LB +0.2 +0.1 +0.1 +0.1 -0.0
plant Tuber-Atlantic +0.1 +0.4 +0.1 +0.0 -0.0
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