Fitness for 5 genes in Pectobacterium carotovorum WPP14

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500 ntHER17_RS13335 and HER17_RS13340 are separated by 12 nucleotidesHER17_RS13340 and HER17_RS13345 overlap by 8 nucleotidesHER17_RS13345 and HER17_RS13350 overlap by 4 nucleotidesHER17_RS13350 and HER17_RS13355 are separated by 58 nucleotides HER17_RS13335: HER17_RS13335 - ABC transporter ATP-binding protein, at 2,956,497 to 2,957,348 _RS13335 HER17_RS13340: HER17_RS13340 - iron ABC transporter permease, at 2,957,361 to 2,958,392 _RS13340 HER17_RS13345: HER17_RS13345 - iron ABC transporter permease, at 2,958,385 to 2,959,374 _RS13345 HER17_RS13350: HER17_RS13350 - iron-siderophore ABC transporter substrate-binding protein, at 2,959,371 to 2,960,321 _RS13350 HER17_RS13355: HER17_RS13355 - TonB-dependent receptor, at 2,960,380 to 2,962,485 _RS13355
Group Condition HER17_RS13335 HER17_RS13340 HER17_RS13345 HER17_RS13350 HER17_RS13355
carbon source M9+polygalacturonate -0.2 -0.1 +0.0 -0.1 -0.1
carbon source M9+glucose +0.2 -0.4 -0.1 -0.1 +0.0
carbon source M9+starch -0.2 -0.1 +0.0 +0.0 -0.1
plant Tuber-Atlantic +0.2 +0.2 -0.6 -0.1 -0.1
carbon source M9+glycerol -0.5 -0.0 +0.2 -0.0 -0.1
carbon source M9+sucrose +0.0 -0.3 -0.1 +0.2 -0.0
carbon source M9+starch +0.0 -0.1 -0.1 +0.2 -0.2
carbon source M9+polygalacturonate +0.1 -0.0 -0.1 -0.1 -0.1
carbon source M9+glycerol -0.4 -0.1 +0.0 +0.3 +0.1
carbon source M9+glycerol -0.3 -0.2 +0.2 +0.0 +0.1
carbon source M9+polygalacturonate +0.2 +0.0 -0.1 -0.1 -0.1
carbon source M9+glucose +0.1 -0.1 +0.1 -0.1 -0.1
carbon source M9+starch +0.0 +0.0 -0.0 +0.1 -0.1
control LB -0.1 -0.0 -0.1 +0.2 +0.1
carbon source M9+glucose+arginine +0.1 -0.3 +0.1 +0.1 +0.0
carbon source M9+glycerol -0.1 -0.2 +0.1 +0.3 +0.1
carbon source M9+glycerol -0.3 +0.0 +0.2 +0.2 +0.1
carbon source M9+sucrose +0.3 -0.0 -0.1 +0.1 -0.0
control LB -0.1 +0.1 +0.1 +0.2 +0.0
plant Tuber-Atlantic +0.9 -0.0 -0.2 -0.3 -0.1
control LB -0.1 +0.1 +0.1 +0.2 -0.0
control LB -0.0 +0.1 +0.2 +0.2 -0.0
control LB +0.0 +0.0 +0.2 +0.2 -0.0
carbon source M9+glycerol -0.1 +0.1 +0.1 +0.2 +0.1
control LB +0.2 -0.1 +0.0 +0.3 +0.1
carbon source M9+glucose+arginine +0.2 -0.2 +0.3 +0.1 +0.1
plant Tuber-Atlantic +0.5 +0.2 -0.0 +0.1 -0.1
carbon source M9+glucose +0.5 +0.2 -0.1 +0.1 +0.0
carbon source M9+glucose+arginine +0.5 -0.2 +0.2 +0.3 +0.0
plant Tuber-Atlantic -0.2 +0.6 +0.4 +0.5 -0.0
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