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Protein
Homologs
Fitness for 5 genes in
Pectobacterium carotovorum WPP14
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HER17_RS11590 and HER17_RS11595 are separated by 459 nucleotides
HER17_RS11595 and HER17_RS11600 are separated by 195 nucleotides
HER17_RS11600 and HER17_RS11605 are separated by 321 nucleotides
HER17_RS11605 and HER17_RS11610 are separated by 384 nucleotides
HER17_RS11590: HER17_RS11590 - DNA-binding protein, at 2,576,446 to 2,576,796
_RS11590
HER17_RS11595: HER17_RS11595 - 4Fe-4S binding protein, at 2,577,256 to 2,578,365
_RS11595
HER17_RS11600: HER17_RS11600 - hypothetical protein, at 2,578,561 to 2,579,439
_RS11600
HER17_RS11605: HER17_RS11605 - hypothetical protein, at 2,579,761 to 2,579,877
_RS11605
HER17_RS11610: HER17_RS11610 - NADP-dependent isocitrate dehydrogenase, at 2,580,262 to 2,581,515
_RS11610
Group
Condition
HER17
_RS11590
HER17
_RS11595
HER17
_RS11600
HER17
_RS11605
HER17
_RS11610
control
LB
-0.6
+0.0
-0.2
N.D.
N.D.
carbon source
M9+glycerol
-0.6
-0.0
-0.1
N.D.
N.D.
carbon source
M9+glycerol
-0.2
-0.1
-0.1
N.D.
N.D.
carbon source
M9+glycerol
-0.3
+0.0
-0.0
N.D.
N.D.
control
LB
-0.3
-0.0
+0.1
N.D.
N.D.
carbon source
M9+glycerol
-0.2
+0.0
-0.0
N.D.
N.D.
control
LB
-0.1
+0.0
+0.0
N.D.
N.D.
carbon source
M9+glycerol
-0.2
+0.1
+0.1
N.D.
N.D.
carbon source
M9+glycerol
+0.1
-0.0
+0.1
N.D.
N.D.
control
LB
+0.2
-0.0
-0.1
N.D.
N.D.
control
LB
-0.1
+0.0
+0.2
N.D.
N.D.
carbon source
M9+sucrose
+0.1
+0.1
+0.1
N.D.
N.D.
carbon source
M9+polygalacturonate
+0.0
+0.1
+0.2
N.D.
N.D.
plant
Tuber-Atlantic
-0.2
+0.4
+0.2
N.D.
N.D.
carbon source
M9+glucose
+0.3
+0.1
+0.0
N.D.
N.D.
carbon source
M9+starch
+0.2
+0.1
+0.2
N.D.
N.D.
carbon source
M9+polygalacturonate
+0.1
+0.1
+0.3
N.D.
N.D.
carbon source
M9+glucose+arginine
+0.3
+0.3
+0.0
N.D.
N.D.
plant
Tuber-Atlantic
+0.9
-0.2
+0.1
N.D.
N.D.
carbon source
M9+glucose
+0.3
+0.2
+0.2
N.D.
N.D.
carbon source
M9+glucose
-0.1
+0.4
+0.4
N.D.
N.D.
carbon source
M9+starch
+0.5
+0.3
+0.1
N.D.
N.D.
carbon source
M9+sucrose
+0.5
+0.2
+0.2
N.D.
N.D.
plant
Tuber-Atlantic
+0.5
+0.3
+0.0
N.D.
N.D.
carbon source
M9+starch
+0.5
+0.1
+0.3
N.D.
N.D.
plant
Tuber-Atlantic
+0.7
+0.1
+0.2
N.D.
N.D.
carbon source
M9+polygalacturonate
+0.8
+0.2
+0.1
N.D.
N.D.
carbon source
M9+glucose+arginine
+0.5
+0.6
+0.1
N.D.
N.D.
carbon source
M9+glucose+arginine
+0.7
+0.1
+0.4
N.D.
N.D.
carbon source
M9+sucrose
+1.0
+0.2
+0.2
N.D.
N.D.
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