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Cofit
Protein
Homologs
Fitness for 5 genes in
Pectobacterium carotovorum WPP14
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HER17_RS11575 and HER17_RS11580 are separated by 393 nucleotides
HER17_RS11580 and HER17_RS11585 are separated by 393 nucleotides
HER17_RS11585 and HER17_RS11590 are separated by 499 nucleotides
HER17_RS11590 and HER17_RS11595 are separated by 459 nucleotides
HER17_RS11575: HER17_RS11575 - EAL domain-containing protein, at 2,571,999 to 2,574,167
_RS11575
HER17_RS11580: HER17_RS11580 - hypothetical protein, at 2,574,561 to 2,574,818
_RS11580
HER17_RS11585: HER17_RS11585 - helix-turn-helix transcriptional regulator, at 2,575,212 to 2,575,946
_RS11585
HER17_RS11590: HER17_RS11590 - DNA-binding protein, at 2,576,446 to 2,576,796
_RS11590
HER17_RS11595: HER17_RS11595 - 4Fe-4S binding protein, at 2,577,256 to 2,578,365
_RS11595
Group
Condition
HER17
_RS11575
HER17
_RS11580
HER17
_RS11585
HER17
_RS11590
HER17
_RS11595
control
LB
-0.1
-0.9
N.D.
+0.2
-0.0
control
LB
+0.0
-0.5
N.D.
-0.1
-0.0
carbon source
M9+glycerol
-0.0
-0.3
N.D.
-0.2
+0.0
control
LB
-0.0
-0.4
N.D.
-0.1
+0.0
carbon source
M9+glycerol
+0.1
-0.3
N.D.
-0.2
-0.1
carbon source
M9+glycerol
+0.0
+0.1
N.D.
-0.6
-0.0
control
LB
+0.1
+0.1
N.D.
-0.6
+0.0
control
LB
+0.0
-0.1
N.D.
-0.3
-0.0
carbon source
M9+glycerol
-0.1
+0.0
N.D.
-0.3
+0.0
carbon source
M9+glycerol
+0.1
-0.2
N.D.
-0.2
+0.1
control
LB
+0.1
-0.2
N.D.
-0.1
+0.0
plant
Tuber-Atlantic
-0.2
-0.0
N.D.
-0.2
+0.4
carbon source
M9+glucose
+0.2
-0.6
N.D.
+0.3
+0.2
carbon source
M9+glucose
+0.1
-0.3
N.D.
+0.3
+0.1
carbon source
M9+polygalacturonate
+0.2
+0.0
N.D.
+0.0
+0.1
carbon source
M9+starch
+0.1
-0.2
N.D.
+0.5
+0.1
plant
Tuber-Atlantic
-0.4
+0.3
N.D.
+0.9
-0.2
carbon source
M9+sucrose
+0.1
+0.3
N.D.
+0.1
+0.1
carbon source
M9+polygalacturonate
+0.0
+0.4
N.D.
+0.1
+0.1
carbon source
M9+starch
+0.1
+0.3
N.D.
+0.2
+0.1
carbon source
M9+glucose+arginine
+0.1
+0.2
N.D.
+0.3
+0.3
plant
Tuber-Atlantic
-0.7
+0.9
N.D.
+0.5
+0.3
carbon source
M9+starch
+0.1
+0.3
N.D.
+0.5
+0.3
carbon source
M9+sucrose
+0.1
+0.5
N.D.
+0.5
+0.2
carbon source
M9+polygalacturonate
-0.0
+0.2
N.D.
+0.8
+0.2
carbon source
M9+glucose+arginine
+0.1
+0.3
N.D.
+0.7
+0.1
plant
Tuber-Atlantic
-0.2
+0.6
N.D.
+0.7
+0.1
carbon source
M9+glucose
+0.2
+0.8
N.D.
-0.1
+0.4
carbon source
M9+glucose+arginine
+0.1
+0.2
N.D.
+0.5
+0.6
carbon source
M9+sucrose
+0.0
+0.4
N.D.
+1.0
+0.2
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HER17_RS11585
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