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Fitness for 5 genes in
Pectobacterium carotovorum WPP14
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HER17_RS11505 and HER17_RS11510 are separated by 43 nucleotides
HER17_RS11510 and HER17_RS11515 are separated by 95 nucleotides
HER17_RS11515 and HER17_RS11520 are separated by 2 nucleotides
HER17_RS11520 and HER17_RS11525 are separated by 257 nucleotides
HER17_RS11505: HER17_RS11505 - 50S ribosomal protein L20, at 2,556,488 to 2,556,844
_RS11505
HER17_RS11510: HER17_RS11510 - 50S ribosomal protein L35, at 2,556,888 to 2,557,085
_RS11510
HER17_RS11515: HER17_RS11515 - translation initiation factor IF-3, at 2,557,181 to 2,557,723
_RS11515
HER17_RS11520: HER17_RS11520 - threonine--tRNA ligase, at 2,557,726 to 2,559,654
_RS11520
HER17_RS11525: HER17_RS11525 - amino acid permease, at 2,559,912 to 2,561,312
_RS11525
Group
Condition
HER17
_RS11505
HER17
_RS11510
HER17
_RS11515
HER17
_RS11520
HER17
_RS11525
plant
Tuber-Atlantic
N.D.
N.D.
N.D.
N.D.
-0.3
plant
Tuber-Atlantic
N.D.
N.D.
N.D.
N.D.
-0.2
carbon source
M9+glycerol
N.D.
N.D.
N.D.
N.D.
-0.2
control
LB
N.D.
N.D.
N.D.
N.D.
-0.1
carbon source
M9+sucrose
N.D.
N.D.
N.D.
N.D.
-0.1
carbon source
M9+glucose+arginine
N.D.
N.D.
N.D.
N.D.
-0.1
carbon source
M9+glycerol
N.D.
N.D.
N.D.
N.D.
-0.1
plant
Tuber-Atlantic
N.D.
N.D.
N.D.
N.D.
-0.1
control
LB
N.D.
N.D.
N.D.
N.D.
-0.1
carbon source
M9+glycerol
N.D.
N.D.
N.D.
N.D.
-0.1
carbon source
M9+starch
N.D.
N.D.
N.D.
N.D.
-0.0
carbon source
M9+glycerol
N.D.
N.D.
N.D.
N.D.
-0.0
plant
Tuber-Atlantic
N.D.
N.D.
N.D.
N.D.
-0.0
control
LB
N.D.
N.D.
N.D.
N.D.
-0.0
carbon source
M9+sucrose
N.D.
N.D.
N.D.
N.D.
+0.0
carbon source
M9+glycerol
N.D.
N.D.
N.D.
N.D.
+0.0
carbon source
M9+glycerol
N.D.
N.D.
N.D.
N.D.
+0.0
control
LB
N.D.
N.D.
N.D.
N.D.
+0.1
carbon source
M9+starch
N.D.
N.D.
N.D.
N.D.
+0.1
carbon source
M9+polygalacturonate
N.D.
N.D.
N.D.
N.D.
+0.1
carbon source
M9+sucrose
N.D.
N.D.
N.D.
N.D.
+0.1
carbon source
M9+polygalacturonate
N.D.
N.D.
N.D.
N.D.
+0.1
carbon source
M9+starch
N.D.
N.D.
N.D.
N.D.
+0.1
carbon source
M9+glucose
N.D.
N.D.
N.D.
N.D.
+0.2
carbon source
M9+glucose+arginine
N.D.
N.D.
N.D.
N.D.
+0.2
carbon source
M9+polygalacturonate
N.D.
N.D.
N.D.
N.D.
+0.2
control
LB
N.D.
N.D.
N.D.
N.D.
+0.2
carbon source
M9+glucose
N.D.
N.D.
N.D.
N.D.
+0.2
carbon source
M9+glucose
N.D.
N.D.
N.D.
N.D.
+0.5
carbon source
M9+glucose+arginine
N.D.
N.D.
N.D.
N.D.
+0.6
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