Fitness for 5 genes in Pectobacterium carotovorum WPP14

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 31 experiments or choose conditions or try the comparative fitness browser

500 ntHER17_RS11425 and HER17_RS11430 are separated by 13 nucleotidesHER17_RS11430 and HER17_RS11435 are separated by 15 nucleotidesHER17_RS11435 and HER17_RS11440 are separated by 247 nucleotidesHER17_RS11440 and HER17_RS11445 are separated by 349 nucleotides HER17_RS11425: HER17_RS11425 - carbohydrate ABC transporter permease, at 2,539,701 to 2,540,606 _RS11425 HER17_RS11430: HER17_RS11430 - ABC transporter ATP-binding protein, at 2,540,620 to 2,541,747 _RS11430 HER17_RS11435: HER17_RS11435 - ABC transporter substrate-binding protein, at 2,541,763 to 2,543,055 _RS11435 HER17_RS11440: HER17_RS11440 - porin, at 2,543,303 to 2,544,031 _RS11440 HER17_RS11445: HER17_RS11445 - alpha/beta hydrolase, at 2,544,381 to 2,545,334 _RS11445
Group Condition HER17_RS11425 HER17_RS11430 HER17_RS11435 HER17_RS11440 HER17_RS11445
plant Tuber-Atlantic -0.3 -0.3 -0.4 -0.4 +0.4
plant Tuber-Atlantic -0.3 -0.4 -0.3 -0.3 +0.4
carbon source M9+polygalacturonate -0.2 -0.1 -0.3 -0.4 +0.2
carbon source M9+polygalacturonate -0.2 -0.2 -0.3 -0.5 +0.3
control LB -0.1 +0.1 -0.2 -0.0 -0.1
control LB -0.1 -0.0 +0.0 +0.0 -0.1
plant Tuber-Atlantic -0.2 -0.0 -0.3 -0.0 +0.4
control LB -0.1 +0.2 -0.0 -0.1 -0.1
control LB +0.1 +0.0 -0.1 +0.1 -0.1
carbon source M9+glycerol -0.0 +0.0 +0.0 +0.2 -0.1
carbon source M9+glycerol -0.2 +0.1 +0.1 -0.0 +0.1
carbon source M9+glucose +0.1 -0.2 +0.1 +0.1 +0.1
carbon source M9+glycerol -0.0 +0.2 -0.0 +0.2 -0.0
carbon source M9+sucrose -0.0 -0.0 +0.1 +0.1 +0.1
plant Tuber-Atlantic +0.1 -0.2 +0.2 +0.1 +0.0
carbon source M9+glycerol -0.2 +0.1 +0.0 +0.3 +0.0
carbon source M9+glycerol -0.2 +0.3 +0.1 +0.1 +0.1
carbon source M9+glucose +0.1 +0.3 +0.0 +0.0 -0.0
carbon source M9+sucrose +0.2 +0.1 +0.1 +0.1 +0.0
carbon source M9+glycerol -0.0 +0.1 -0.0 +0.3 +0.2
carbon source M9+glucose+arginine -0.0 -0.0 +0.2 -0.1 +0.4
carbon source M9+glucose+arginine -0.0 -0.0 +0.5 -0.2 +0.3
carbon source M9+starch +0.1 +0.3 +0.1 +0.1 +0.1
carbon source M9+glucose -0.2 +0.0 +0.2 +0.3 +0.2
carbon source M9+polygalacturonate +0.1 +0.3 +0.2 -0.0 +0.2
carbon source M9+starch +0.2 +0.2 +0.1 +0.0 +0.1
carbon source M9+sucrose +0.2 -0.0 +0.2 +0.1 +0.3
carbon source M9+starch +0.2 +0.3 +0.2 -0.0 +0.3
carbon source M9+glucose+arginine +0.2 +0.1 +0.1 +0.3 +0.1
control LB +0.0 +0.3 +0.1 +0.3 +0.2
remove
HER17_RS11425
plot		 remove
HER17_RS11430
plot		 remove
HER17_RS11435		 remove
HER17_RS11440
plot		 remove
HER17_RS11445
plot