Fitness for 5 genes in Pectobacterium carotovorum WPP14

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500 ntHER17_RS10865 and HER17_RS10870 are separated by 132 nucleotidesHER17_RS10870 and HER17_RS10875 are separated by 379 nucleotidesHER17_RS10875 and HER17_RS10880 are separated by 368 nucleotidesHER17_RS10880 and HER17_RS10885 are separated by 58 nucleotides HER17_RS10865: HER17_RS10865 - dipeptide/tripeptide permease DtpA, at 2,425,453 to 2,426,970 _RS10865 HER17_RS10870: HER17_RS10870 - HTH-type transcriptional regulator CysB, at 2,427,103 to 2,428,077 _RS10870 HER17_RS10875: HER17_RS10875 - type I DNA topoisomerase, at 2,428,457 to 2,431,057 _RS10875 HER17_RS10880: HER17_RS10880 - YciN family protein, at 2,431,426 to 2,431,695 _RS10880 HER17_RS10885: HER17_RS10885 - protease SohB, at 2,431,754 to 2,432,800 _RS10885
Group Condition HER17_RS10865 HER17_RS10870 HER17_RS10875 HER17_RS10880 HER17_RS10885
carbon source M9+polygalacturonate +0.2 -5.7 N.D. -0.3 +0.2
carbon source M9+polygalacturonate +0.2 -5.7 N.D. +0.0 +0.0
carbon source M9+glucose +0.5 -5.7 N.D. -0.1 -0.0
carbon source M9+glucose +0.5 -5.1 N.D. -0.7 +0.0
carbon source M9+glucose +0.5 -4.7 N.D. -0.4 +0.2
carbon source M9+sucrose +0.2 -4.6 N.D. -0.0 +0.2
carbon source M9+glucose+arginine +0.5 -5.2 N.D. +0.4 +0.1
carbon source M9+sucrose +0.2 -4.9 N.D. +0.2 +0.4
carbon source M9+polygalacturonate +0.2 -4.5 N.D. +0.5 +0.1
carbon source M9+starch +0.1 -4.1 N.D. +0.1 +0.2
carbon source M9+starch -0.1 -3.5 N.D. +0.1 -0.1
carbon source M9+glucose+arginine +0.5 -4.5 N.D. +0.2 +0.3
carbon source M9+glycerol +0.1 -3.2 N.D. -0.4 +0.0
carbon source M9+starch +0.0 -3.9 N.D. +0.1 +0.3
carbon source M9+sucrose +0.1 -3.8 N.D. +0.3 +0.0
carbon source M9+glucose+arginine +0.6 -4.2 N.D. +0.2 +0.2
carbon source M9+glycerol +0.2 -3.2 N.D. -0.2 +0.1
carbon source M9+glycerol +0.2 -3.2 N.D. -0.0 -0.0
carbon source M9+glycerol +0.3 -3.1 N.D. -0.3 +0.1
carbon source M9+glycerol +0.1 -3.0 N.D. -0.1 +0.2
plant Tuber-Atlantic +0.1 -1.7 N.D. -0.5 -0.0
carbon source M9+glycerol +0.1 -2.4 N.D. +0.2 +0.1
plant Tuber-Atlantic -0.2 -1.6 N.D. +0.1 +0.1
plant Tuber-Atlantic +0.2 -2.0 N.D. +0.4 +0.2
plant Tuber-Atlantic -0.3 -1.0 N.D. +0.2 -0.0
control LB -0.1 -0.2 N.D. -0.6 -0.0
control LB -0.0 +0.2 N.D. -0.5 +0.1
control LB -0.1 -0.0 N.D. -0.2 +0.2
control LB -0.1 +0.2 N.D. -0.3 +0.1
control LB -0.1 +0.1 N.D. -0.1 +0.2
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