Fitness for 5 genes in Pectobacterium carotovorum WPP14

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 31 experiments or choose conditions or try the comparative fitness browser

500 ntHER17_RS09495 and HER17_RS09500 are separated by 171 nucleotidesHER17_RS09500 and HER17_RS09505 overlap by 4 nucleotidesHER17_RS09505 and HER17_RS09510 are separated by 380 nucleotidesHER17_RS09510 and HER17_RS09515 are separated by 74 nucleotides HER17_RS09495: HER17_RS09495 - peptide ABC transporter substrate-binding protein SapA, at 2,088,034 to 2,089,722 _RS09495 HER17_RS09500: HER17_RS09500 - DUF2384 domain-containing protein, at 2,089,894 to 2,090,334 _RS09500 HER17_RS09505: HER17_RS09505 - RES family NAD+ phosphorylase, at 2,090,331 to 2,090,819 _RS09505 HER17_RS09510: HER17_RS09510 - cellulase family glycosylhydrolase, at 2,091,200 to 2,092,726 _RS09510 HER17_RS09515: HER17_RS09515 - phage shock protein operon transcriptional activator, at 2,092,801 to 2,093,790 _RS09515
Group Condition HER17_RS09495 HER17_RS09500 HER17_RS09505 HER17_RS09510 HER17_RS09515
control LB -1.6 +0.0 -0.0 -0.2 -0.1
control LB -1.1 -0.1 -0.1 +0.0 -0.0
carbon source M9+glucose -0.3 -1.1 -0.0 +0.0 +0.0
control LB -1.1 -0.0 -0.1 -0.0 +0.1
plant Tuber-Atlantic -0.9 +0.0 -0.2 +0.2 -0.3
carbon source M9+glycerol -0.5 -0.3 +0.1 -0.0 -0.4
control LB -1.0 -0.2 +0.0 -0.0 +0.1
carbon source M9+sucrose -1.0 -0.4 +0.1 +0.1 +0.1
carbon source M9+sucrose -0.4 -0.6 -0.1 -0.0 +0.0
plant Tuber-Atlantic -0.4 -0.5 -0.0 -0.2 +0.1
carbon source M9+glycerol -0.4 -0.4 +0.1 -0.1 -0.2
carbon source M9+glucose+arginine -0.5 -0.7 +0.2 +0.1 -0.1
carbon source M9+glucose+arginine -0.1 -0.4 -0.2 +0.1 -0.3
control LB -0.8 +0.3 -0.0 -0.0 -0.2
carbon source M9+glycerol -0.6 +0.1 -0.0 -0.1 -0.1
carbon source M9+glycerol -0.2 -0.2 -0.2 -0.1 -0.0
carbon source M9+starch -0.5 -0.2 +0.0 -0.0 +0.1
plant Tuber-Atlantic -0.3 +0.1 -0.3 +0.2 -0.2
carbon source M9+starch -0.5 -0.2 -0.1 +0.1 +0.1
carbon source M9+polygalacturonate -0.3 -0.5 -0.0 +0.1 +0.2
control LB -0.7 +0.2 +0.1 -0.1 +0.1
carbon source M9+glycerol -0.3 -0.1 +0.0 -0.0 +0.1
carbon source M9+polygalacturonate -0.5 -0.1 -0.0 +0.0 +0.2
carbon source M9+glucose+arginine -0.4 +0.1 -0.2 -0.0 +0.2
carbon source M9+glucose +0.2 -0.1 -0.4 -0.0 +0.3
carbon source M9+polygalacturonate -0.4 -0.2 +0.2 +0.0 +0.3
plant Tuber-Atlantic -0.2 +0.3 +0.0 +0.0 -0.1
carbon source M9+glucose -0.4 +0.0 -0.1 +0.1 +0.5
carbon source M9+sucrose -0.3 +0.0 +0.1 +0.0 +0.3
carbon source M9+starch -0.2 +0.1 +0.1 -0.1 +0.2
remove
HER17_RS09495
plot		 remove
HER17_RS09500
plot		 remove
HER17_RS09505		 remove
HER17_RS09510
plot		 remove
HER17_RS09515
plot