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Protein
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Fitness for 5 genes in
Pectobacterium carotovorum WPP14
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HER17_RS09400 and HER17_RS09405 are separated by 333 nucleotides
HER17_RS09405 and HER17_RS09410 are separated by 183 nucleotides
HER17_RS09410 and HER17_RS09415 are separated by 312 nucleotides
HER17_RS09415 and HER17_RS09420 are separated by 71 nucleotides
HER17_RS09400: HER17_RS09400 - osmotically-inducible lipoprotein OsmB, at 2,061,149 to 2,061,364
_RS09400
HER17_RS09405: HER17_RS09405 - L-ribulose-5-phosphate 4-epimerase, at 2,061,698 to 2,062,393
_RS09405
HER17_RS09410: HER17_RS09410 - carbon starvation protein A, at 2,062,577 to 2,064,640
_RS09410
HER17_RS09415: HER17_RS09415 - MFS transporter, at 2,064,953 to 2,066,134
_RS09415
HER17_RS09420: HER17_RS09420 - Lrp/AsnC family transcriptional regulator, at 2,066,206 to 2,066,709
_RS09420
Group
Condition
HER17
_RS09400
HER17
_RS09405
HER17
_RS09410
HER17
_RS09415
HER17
_RS09420
carbon source
M9+polygalacturonate
-0.0
-3.3
+0.0
+0.0
-0.2
carbon source
M9+polygalacturonate
-0.0
-3.2
-0.0
+0.1
+0.1
plant
Tuber-Atlantic
-0.2
-0.5
-0.1
+0.1
-0.3
control
LB
-0.5
-0.1
-0.2
-0.1
+0.1
plant
Tuber-Atlantic
-0.2
-0.2
-0.6
+0.1
+0.1
plant
Tuber-Atlantic
-0.2
-0.6
-0.3
+0.1
+0.3
carbon source
M9+glucose+arginine
+0.1
+0.0
+0.0
-0.3
-0.2
control
LB
-0.2
+0.1
-0.2
-0.1
-0.0
carbon source
M9+glycerol
-0.0
+0.2
-0.3
-0.0
-0.1
carbon source
M9+sucrose
-0.0
+0.1
+0.0
+0.0
-0.2
control
LB
-0.0
+0.2
-0.0
-0.1
+0.0
carbon source
M9+glycerol
+0.0
-0.1
+0.0
-0.0
+0.3
carbon source
M9+starch
-0.2
+0.1
+0.1
+0.1
-0.0
carbon source
M9+glycerol
+0.1
+0.2
-0.1
-0.0
-0.1
control
LB
-0.0
+0.2
-0.0
-0.1
+0.2
carbon source
M9+sucrose
+0.1
+0.2
+0.0
+0.0
-0.1
carbon source
M9+starch
+0.1
-0.0
-0.0
+0.1
+0.2
carbon source
M9+polygalacturonate
+0.1
+0.1
+0.0
+0.1
+0.1
carbon source
M9+glycerol
+0.1
+0.2
+0.0
-0.0
+0.0
control
LB
+0.2
+0.1
-0.1
-0.1
+0.3
carbon source
M9+starch
+0.1
+0.1
+0.1
+0.1
-0.0
carbon source
M9+sucrose
+0.5
+0.0
-0.2
-0.0
+0.1
plant
Tuber-Atlantic
-0.2
-0.1
+0.1
+0.6
+0.0
carbon source
M9+glucose+arginine
+0.4
+0.0
+0.0
-0.1
+0.2
carbon source
M9+glucose
+0.6
+0.3
-0.0
-0.4
+0.1
carbon source
M9+glucose
+0.3
+0.2
-0.0
-0.1
+0.3
carbon source
M9+glycerol
+0.4
+0.2
-0.0
-0.0
+0.2
carbon source
M9+glucose
+0.1
+0.3
+0.2
-0.2
+0.4
carbon source
M9+glycerol
+0.1
+0.3
-0.1
-0.0
+0.5
carbon source
M9+glucose+arginine
+0.3
+0.3
+0.1
-0.1
+0.4
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