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Fitness for 5 genes in
Pectobacterium carotovorum WPP14
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HER17_RS09325 and HER17_RS09330 are separated by 277 nucleotides
HER17_RS09330 and HER17_RS09335 are separated by 327 nucleotides
HER17_RS09335 and HER17_RS09340 are separated by 44 nucleotides
HER17_RS09340 and HER17_RS09345 overlap by 1 nucleotides
HER17_RS09325: HER17_RS09325 - GTP cyclohydrolase II, at 2,046,236 to 2,046,829
_RS09325
HER17_RS09330: HER17_RS09330 - phosphatidylglycerophosphatase B, at 2,047,107 to 2,047,883
_RS09330
HER17_RS09335: HER17_RS09335 - D-ribose ABC transporter substrate-binding protein, at 2,048,211 to 2,049,152
_RS09335
HER17_RS09340: HER17_RS09340 - DUF2291 domain-containing protein, at 2,049,197 to 2,049,829
_RS09340
HER17_RS09345: HER17_RS09345 - sugar ABC transporter ATP-binding protein, at 2,049,829 to 2,051,382
_RS09345
Group
Condition
HER17
_RS09325
HER17
_RS09330
HER17
_RS09335
HER17
_RS09340
HER17
_RS09345
carbon source
M9+glycerol
N.D.
-1.4
+0.2
-0.2
-0.0
plant
Tuber-Atlantic
N.D.
-0.1
-0.7
-0.6
-0.0
carbon source
M9+glycerol
N.D.
-1.3
+0.2
-0.0
-0.1
carbon source
M9+glycerol
N.D.
-1.2
-0.1
+0.1
-0.1
carbon source
M9+glycerol
N.D.
-1.2
+0.1
-0.1
+0.2
carbon source
M9+polygalacturonate
N.D.
-0.6
-0.1
-0.2
-0.1
carbon source
M9+glycerol
N.D.
-0.8
+0.3
-0.3
-0.2
control
LB
N.D.
-0.8
+0.1
-0.3
+0.0
plant
Tuber-Atlantic
N.D.
-0.6
-0.3
-0.2
+0.2
control
LB
N.D.
-0.8
+0.2
-0.1
-0.1
carbon source
M9+glycerol
N.D.
-0.8
+0.0
-0.1
-0.0
control
LB
N.D.
-0.7
+0.1
-0.0
-0.1
plant
Tuber-Atlantic
N.D.
-0.1
-0.3
-0.1
-0.1
carbon source
M9+polygalacturonate
N.D.
-0.5
+0.1
+0.1
-0.1
carbon source
M9+sucrose
N.D.
-0.3
+0.2
-0.1
-0.2
carbon source
M9+starch
N.D.
-0.3
+0.1
-0.1
-0.1
control
LB
N.D.
-0.6
+0.3
-0.1
+0.0
carbon source
M9+polygalacturonate
N.D.
-0.5
+0.1
-0.0
+0.0
control
LB
N.D.
-0.7
+0.2
-0.0
+0.2
control
LB
N.D.
-0.6
+0.3
-0.0
+0.1
carbon source
M9+starch
N.D.
-0.4
+0.2
+0.1
+0.0
plant
Tuber-Atlantic
N.D.
+0.5
-0.2
-0.4
-0.0
carbon source
M9+sucrose
N.D.
-0.3
+0.0
+0.3
+0.0
carbon source
M9+starch
N.D.
-0.2
+0.1
+0.1
+0.1
carbon source
M9+glucose+arginine
N.D.
+1.7
-0.5
-0.3
-0.2
carbon source
M9+glucose+arginine
N.D.
+1.7
-0.0
+0.0
+0.0
carbon source
M9+glucose+arginine
N.D.
+1.7
+0.0
+0.1
+0.0
carbon source
M9+glucose
N.D.
+1.9
-0.1
-0.0
+0.1
carbon source
M9+glucose
N.D.
+2.0
+0.1
-0.2
+0.1
carbon source
M9+glucose
N.D.
+2.0
+0.1
+0.3
-0.3
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HER17_RS09335
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